Detail



ID : Ahg923788

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923788|scaffold_105069.1
Sequence
TTTCAGTTTT CCACACATAA ATGGCGATTC GAACATTCTC TTCTCTTGTT CGCGCTCTTC ACCAAACCCC TAAATCTCAG TCATTTCGTT TCTTCTCTAC TCTTCTACAC GATCCACCAT CACCCGAACT AGTAAACGAG ATCTCCCGCG TTCTGAGCGA TCACCGGAAC CCTAAAGACG ACCTCGAGCA CACTCTCGCC GCTTACTCTC CCCGAGTTTC GTCGAATCTA GTCGAACAAG TATTGAAACG CTGCAAAAAT CTCGGCTTTC CTGCTCATAG ATTCTTTCTA TGGGCAAAAA GAATCCCAGA TTTTGAACAT AGCTTGGAAA GTTATCACAT TTTGGTTGAG ATTTTGGGTT GTAGTAAGCA ATTCGCTTTG CTTTGGGACT TTTTAATCGA AGCTAGAGAG TATAATTACT TTGAGATTAC TTCTAAAGTG TTTTGGATTG TGTTTAGAGC TTATAGTAGA GCTAATTTAC CTAGTGAAGC TAGTAGAGCT TTTAATCGGA TGGTTGAGTT TGGGATTAAG CCTTGTGTTG ATGATCTTGA TCAGCTTTTG CATTCGCTTT GCGATAGGAA ACATGTGAAT CATGCTCAGG AGTTTTTCGA TAAAGCGAAA GGGTTCGGGA TTGTACCGAG TGCGAAGACG TATAGCATTT TGGTTAGAGG GTGGGCGAGA ATCCGAGACG CGTCGGGTGC ACGTAAGGTG TTTGATGAAA TGCTTGAGAA TAATTGTGTT GTGGATTTGC TTGCTTACAA TGCTCTTTTG GACGCTTTGT GTAAATCTGG TGATGTTGAT GGAGCTTATA AGATGTTTCA AGAAATGGGT AATCTTGGAC TTAAACCGGA TGCGTATAGT TTTGCGATAT TCATTCACTC GTACTGCGAT GCAAGCGATG TTCACTCGGC TTATAAAGTA CTTGATCGGA TGAAAAGGTA CGATCTTGTA CCCAATGTGT ACACATTTAA CCATATCATC AAAACACTCT GCAAGAACGA GAAAGTTGAT GATGCTTACT TACTGTTAGA CGAGATGATT CAAAAAGGAG CTAATCCGGA TACTTGGACT TACAATTCGA TAATGGCTTA CCACTGCGAT CACTGCGAAG TGAACCGAGC AACAAAGCTG TTATCTAGAA TGGATAGAAC CAAGTGTTTA CCGGATAGAC ACACTTACAA CATGGTTCTC AAGTTGTTGA TACGAATAGG GAGATTTGAC CGCGTGACAG AGATATGGGA AGGAATGAGT GAGAGAAAGT TTTATCCAAC GGTTGCGACT TACACTGTGA TGATTCATGG GTTAGTGAGG AAGAAAGGGA AGTTAGAGGA AGCTTGTAGG TACTTTGAGA TGATGATTGA TGAAGGGATA CCGCCGTATT CGACAACGGT TGAGATGTTG AGGAATCGGT TAGTCGGTTG GGGACAAATG GATGTTGTGG ATGTTTTGGC AGGGAAGATG GAGAGAAGCA GTTCTTGTTC GGTTCGAGAT ATGGCGGTTG AGATGAGAGG AAAGAGAAGG AGATTGGGAC GTCGAAGTGA AGGAAGTGAA GATGATGATG ATGATGATGA TTTTGAGCTT CAAAGAGATA CATTTTAACA TTATGAATAA TCTTTTGA 
Length1618
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26689524.. 26691101
Download Sequence
A.thaliana
AGI-codeAT1G52640.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
46.465 Ahg917658 subtilase 4.13
52.9339 Ahg316133 Protein of unknown function (DUF579)
63.0238 Ahg475881 terminal EAR1-like 2
82.3408 Ahg347353
91.433 Ahg334832 HCO3- transporter family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression