Detail



ID : Ahg924071

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924071|scaffold_105352.1
Sequence
ATCTTTTTCT ATCTTTTCAA ATGCTTACTT CCTTCAAATC CTCTAGCTCC TCCTCCGAAG ATGCCACCGC CACCACCACC GATAATCCTC CTCCTTTTTT TCTGGCCTCC TCTTCCGCCG CAACCTCCGC CTCCCATCAC CTCCGTCGTC TCCTTTTCAC CGCTGCGAAT TTCGTCTCCC AGTCAAACTT CACCGCCGCT CAAAACTTAC TCTCGATCCT GTCCCTTAAC TCTTCTCCTC ACGGTGACTC CACCGAGCGA CTTGTCCACC TCTTCACAAA AGCCTTGTCC GTACGGATCA ACCGTCAACA ACAAGATCCG ACGGCTGAAA CGGTGGCCAC GTGGACGACG AACGAAATGA CGATGAGTAA CTCCACGGTG TTCACGAGCA GTGTATGCAA AGAACAGTTC TTATTTCGGA CCAAGAACAA CAATTCTGAT TTCGAATCTT GTTACTATCT TTGGCTGAAT CAACTAACGC CGTTTATTCG GTTCGGTCAT TTAACGGCGA ACCAAGCGAT CCTTGACGCG ACGGAGACAA ACGATAACGG AGCTCTACAT ATACTTGATT TAGATATATC ACAAGGACTT CAATGGCCTC CATTGATGCA AGCCCTAGCA GAGAGGTCAT CAAACCCTAA CAGTCCACCT CCATCTCTCC GCATAACCGG ATGCGGTCGA GACGTAACCG GATTAAACCG AACCGGAGAC AGGTTAACCC GGTTCGCTGA CTCTTTAGGT CTCCAATTTC AGTTTCACAC GCTAGTGATC GTAGAAGAAG AAGATCTCGC CGGACTTTTG TTACAGATCC GATTGTTAGC TCTCTCTGCC GTGCAAGGAG AGACCATTGC CGTCAATTGT GTTCACTTCC TCCACAAAAT CTTTAACGAC GATGGAGATA TGATAGGTCA CTTTTTGTCA GCGATCAAGA GCTTAAACCC TAGAATCGTG ACAATGGCGG AGAGAGAAGC GAATCACGGA GATCATTCGT TCTTGAATAG ATTCTCCGAG GCAGTGGATC ATTACATGGC GATATTTGAT TCGTTGGAAG CGACGTTGCC GCCAAATAGC CGAGAGAGAT TAACCCTAGA GCAACGGTGG TTTGGTATGG AGATTTTGGA TGTTGTGGCA GCAGAAGCGA CGGAGAGAAA GCAAAGACAT CGGAGGTTTG AGATTTGGGA AGAGATGATG AAGAGATTTG GTTTCGTTAA CGTTCCTATT GGAAGCTTTG CTTTGTCTCA AGCTAAGCTT CTTCTTAGAC TCCATTATCC TTCAGAAGGA TATAATCTTC AGTTCCTTAA CAATTCTTTG TTTCTTGGCT GGCAAAATCG TCTCCTCTTT TCTGTTTCAT CGTGGAAATG ATCCAAAGAG GAGAAAAAAA A 
Length1381
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27927655.. 27929035
Download Sequence
A.thaliana
AGI-codeAT1G55580.1
DescriptionGRAS family transcription factor
TAIR curator summaryEncodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.
Alias[LAS][SCL18][Lateral Suppressor][SCARECROW-LIKE 18]
Gene coexpression
MR
MR Locus Description
14.9666 Ahg933089
19.6723 Ahg491541 cytochrome P450, family 82, subfamily C, polypeptide 2
24.4949 Ahg918148 Scorpion toxin-like knottin superfamily protein
25.6515 Ahg493352 HXXXD-type acyl-transferase family protein
33.5857 Ahg318086 hydroxyproline-rich glycoprotein family protein
35.426 Ahg321134
36.3043 Ahg495065 ethylene response factor 110
44.2606 Ahg497075 transposable element gene
48.5592 Ahg908565
49.6387 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression