Detail



ID : Ahg924417

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924417|scaffold_105698.1
Sequence
GACAGTAGCT TCATGAAAGG ATGTCGGATG TGATGACACT GCTTCTGGTC GACCAATTGT TGGATCAAGC GTTGAAAACC CTGTCGGGTG GAGCCGTGGA GAGTCGCAGA GGGTTGGCAT TACTTTATGT TTGGGGAAGC CCGCTGATAT CTATCCGTGA GCCAAGTGCG TATTTGGACT CCGAGCAACG AATCACTGCT TCAAAAGTCA TCAAACGGTT TCTTTCACGC AAAGAAAACC GGCGATGTCT GCCTATATTA CTGTTGCTGC ATTTCTTTTG GGGGCTCTAT GCTCAAATAA AGCCATTCTC CAATGTGATT GTTGTTACTA AAGGAAACAA CTTTAGTAAT GATCTAAAAT CGATTCACAT GAGTATCTTG ATCCGATTCT CCAGTAGTAT TCTTCAAATA GACATGCTTA GCCATATTAC TGTTTTGCGG GTCTCCAGTG CCGTCGGACG ATCTTCGAGA GAAGCATTGC AGCCGTTCGT GCTGGTGGGT TTTCAGCCTG GTTGTAGTTG GTATCATGGT ATGGCTGTGA TTGGTACTGC CATCCTCTAT TTTACATTTT ATGTTTGGTT GGGCATGGAT TCACCAGGCT CAATGAATGT TACTGACCAG GCAATTTATC TTTACAGTAT TGTCAATCTT TGCAGGGGAC ATATAGAAGA GTGCAAACTG TATTCACAAA ATCTAAACTG GGAAGAAGAC AAAATATATT GTCGATACAT GTTTGAAAAA AATCAACACC GCCTTACATG GCATACGAGT TAGGAGAAAA ACAATCTTTC ACA 
Length793
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31381601.. 31383557
Download Sequence
A.thaliana
AGI-codeAT1G78920.1
Descriptionvacuolar H+-pyrophosphatase 2
TAIR curator summaryEncodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.
Alias[AtVHP2;1][AVP2][AVPL1][VHP2;1][VP2][vacuolar H+-pyrophosphatase 2][VACUOLAR-PYROPHOSPHATASE LIKE PROTEIN 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg907515
12.1244 Ahg916350
15.4919 Ahg494640 Ribosomal protein S19 family protein
19.4422 Ahg900355
42.1426 Ahg934440 Protein kinase superfamily protein
45.8694 Ahg471495 C2H2 and C2HC zinc fingers superfamily protein
47.9062 Ahg359788
53.9166 Ahg924078 prenylated RAB acceptor 1.G1
61.2372 Ahg946413
70.9013 Ahg934807
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression