Detail



ID : Ahg925439

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925439|scaffold_201000.1
Sequence
TAGGCGAACA GAATCCTTTT GATGCATACT CGGCAAATTT GTTATGGTTC GCTTAACACT TTTCTGTCTG TTCAACTTTC AGGGGCTGCT GAGGAAGCAA CTGCGGTTTT TGGTGAAACA GCTGCTCTCT CCATTCAAAA GCAGTACATG CAACAACTGT CAACTTCCCT CGGTTTAAAC ACGTACAATG AGGAACGTAA TTCAAATTCT ACTAAAGACC CAGGTTCTGA GGATTATAGT CTGAGGCAGT CTAAACACAC ACAAAGCCAT GGCCTTAAAA GATATCTCTG GAAATTTCGA ACGTCATTTT ATAAATGCCT TCGCCAATGG CTGCACAGGT AAACCAAATG TGAACTAAAC CA 
Length362
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8168484.. 8168845
Download Sequence
A.thaliana
AGI-codeAT2G20000.1
DescriptionCDC27 family protein
TAIR curator summaryRequired for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.
Alias[CDC27b][HBT][HOBBIT]
Gene coexpression
MR
MR Locus Description
13.3417 Ahg900218
20.6398 Virus0508
20.6398 Ahg338787 RWP-RK domain-containing protein
22.6053 Ahg925392 Ubiquitin carboxyl-terminal hydrolase-related protein
24.6577 Ahg891972 nucleolin like 1
24.8998 Ahg948917 Protein of unknown function (DUF784)
25.2982 Ahg928674
28.1425 Ahg947464 Concanavalin A-like lectin protein kinase family protein
35.9166 Ahg948843
41.2916 Ahg948918 Protein of unknown function (DUF784)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression