| Annotation |
|---|
| Description | jgi|Araly1|925440|scaffold_201001.1 |
| Sequence |
ATGCAATTTA GGAGGAATCA ATGAAAGGAC ATCAATTAAA ATCCTGGATT TTCGAATTGA GAGAAATAGT GAGAGAGATC AAGAATTCTC ACTATTTCTT AGATTCATGG ACCCAATTCA ATTCAGTGGG ATCTTTCATT CATATTTTTT TCCACCAAGA ACGTTTTAGA AAACTCTTGG ACCCTCGAAT TTTTAGTATC CTACTTTTGC GCAATTCACA GGGTTCAACA AGCAATCGAT ATTTCACGAT CAAGGGTGTA GTACTATTTG TAGTAGCGGC CCTTCTATAT CGTATTAACA ATCGAAATAT GGTCGAAAGC AAAAATCTCT ATTTGAAAGG GCTTCTTCCT ATACCTATGA ATTCCATTGG ACCCAGAAAT GATACATCGG AAGAATCTTT TGGGTCTTGC AATATCAATA GGTTGATTGT TTCGCTCCTG TATCTTACAA AAGGAAAAAA GATCTCTGAG AGCTGTTTCC GGGATCCGAA AGAGAGTACT TGGGTTCTCC CAATAACTCA AAAGTGTATC ATGCCTGAAT CTAACTGGAG TTCGCGGTGG TGGAGGAACT GGATCGGAAA AAAGAGGGAT TTTTGTTGTA AGATATCTAA TGAAACCGTC GCTGGAATTG ATATCTCATT TAAAGAGAAA GATATCAAAT ATCTGGAGTT TCTTTTTGTA TATTATATGG ATGATCCGAT CCGCAAGGGC CATGATTGGG AATTGTTTGA TCGTCTTTCT CCGAGTAAGA GGCGAAACAT AATCAACTTT AATTCGGGAC AGCTATTCGA AATCTTAGTG AAAGACTGGA TTTGTTATCT CATGTTTGCT TTTCGTGAAA AAATACCAAT TGAAGTGGAG GGTTTCTTCA AACAACAAGG AGCTGGGTCA ACTATTCAAT CAAATGATAT TGAGCATGTT TCCCATCTCT TCTCGAGAAA CAAGTGGGCT ATTTCTTTGC AAAATTGTGC TCAATTTCAT ATGTGGCAAT TCCACCAAGA TCTCTTCGTT AGTTGGGGGA AGAATCCGCA CGAATCGGAT TTTTTTAGGA AATTATCGAG AGAGAATTGG ATTTGGTTAG ACAATGTGTG GTTGGTAAAC AAGGATAGAT TTTTTAGCAA GGTACGAAAC GTATCGTCAA ATATTCAATA TGATTCTACA AGATCTAGTT TCGTTCAAGT AACGGATTCT AGCCAATTGA ACGGATCTTC TGATCAATTC ATAGATCCTT TCGATTCCAT TAGTAATGAG GATTCGGAAT ATCACTATCA CACATTGATC AATCAAAGAG AGATTCAACA ACTAAAAGAA AGATCGATTC TTTTGGATCC TTCCTTTATT CAAACGGAAG GAAGAGAGAT AGAATCAGAC CGATTCCCTA AATACCTTTC TGGCTATTCC TCAATGCCCC GGCTATTCAC GGAACGTGAG AAGCGAATGA ATAATCATCT GCTTCCGGAA GAAAGCGAAG AATTTCTTGG GAATCCTACA AGAGCCATTC GTTCTTTTTT CTCTGACAGA TGGTCAGAAC TTTATCTGGG TTCGAATCCT ACTGAGAGGT CCACTAGGGA TCAGAAATTG TTGAAGAAAG AACAAGATGT TTCTTTTGTC CCTTCCAGGC GATCGGAAAA TAAAGAAATA GTTAATATAT TCAAGATAAT TACGTATTTA CAAAATACCG TCTCAATTCA TCCTATTTCA TCAGATCTGG GATGTGATAT GGTTCCGAAG GATGAACTGG ATATGGACAG TTCCAATAAG ATTTCATTCT TGAACAAAAA TCCATTTTTT GATTTATTTC ATCTATTCCA TGAACGGAAG AGGGGGGGAT ACACGTTACG CCACGGGTCA GAAGAGAGAT TTCAAGAAAT GGCAGATCTA TTCACTCTAT CAATAACCGA GCCGGATCTG GTGTATCATA AGGGATTTGC CTTTTCTATT GATTCCTACG GATTGGATCA AAGACAATTC TTGAAGGAGG TTTTCAACTT CAGGGATGAA TCGAAAAAGA AATCTTTATT GGTTCTACCT CCTATTTTTT ATGAAGAAAA TGAATCTTTT TATCGAAGGA TCAGAAAAAA TTGGGTCCGG ATCTCCTGCG GGAATTATTT GGAAGATCCA AAAAGAGTGG TATTTGCTAG CAACAACATA ATGGAGGCAG TCAATCAATA TAGATTGATC CGAAATATGA TTCAAATCCA ATTCCAATAT AGTCCCTATG GGTACATAAG AAATGTATTG AATCGATTCT TTTTAATGAA GAGACCTGAT CGCAACTTCG AATATGGAAT TCAAAGGGAT ATAATAGGAA ATGATACTCT GAATCATAGA ACTATAATGA AAGATACGAT CAACCAACAT TTATCGAATT TGAAAAAGAG TCAGAAGAAA TGGTTCGATC CTCTTATTTT TCTTTCTCAA ACCGAGAGAT CCATAAATCG GGATCCTAAT GCATATAGAT ACAAATGGTC CAATGGGAGC AAGAATTTCC AGGAGCATTT GGAACATTTC GTTTCTGAGC GGAAGAGCCG TTTTCAAGCA GTGTTCGATC AATTATGTAT TAATAAATAT TTGATTGATT GGTCTGAGGT TATTGATAAA AAAGATTTGT CTAAGTCACT TCGTTTCTTT TTGTCTAAGT TACTTCGTTT CTTTTTGTCC AAGTTACTTC TTTTTTTGTC CAAGTTACTT CTCTTTTTGT CTAACTCACT TCCTTTTTTC TTTGTGAGTT TCGAGAATAT CCCTATTCAT AGGTCTGAGA TCCACATCTA TGAATTGAAA GGTCCGAACG ATCAACTCTG CAATCAGTTG TTAGAATCAA TAGGTCTTCA AATCGTTCAT TTGAAAAAGT TGAAACCCTT TTTATTGGAT GATCATAATA CTTCTCAAAA ATCGAAATTC TTGATCAATG GAGGAACAAT ATCACCATTT TTGTTCAATA AAATACCAAA GTGGATGATT GACTCATTCC ATACTAGAAA GAATCGCAGG AAATCTTTTG ATAACACGGA TTCCTATTTC TCAATCGTAT CCCACGATCA AGACAATTGG CTGAATCCCG TGAAACCATT TCAGAGAAGT TCATTGATAT CTTCTTTTTC TAAAGCAAAT CGACTTCGAT TCTTGAATAA TCCACATCAC TTCTGCTTCT ATTGTAACAA AAGATTCCCT TTTTATGTGG AAAAGGCCCG TCTCAATAAT TCTGATTTTA CGTATGGACA ATTCCTCACT ATCTTGTTCA TTCACAACAA AATATTTTCT TCGTGCGGTG GTAAAAAAAA ACATGCTTTT TTGGAGAGAG ATACTATTTC ACCTTCGTCA ATCGAGTCAC AGGTATCTGC CTCCAACTAG AAAAAGATTC TTTAACAACT AG |
| Length | 3372 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8171936.. 8175307 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | ATCG01280.1 |
| Description | Chloroplast Ycf2;ATPase, AAA type, core |
| TAIR curator summary | hypothetical protein |
| Alias | [YCF2.2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg907865 | photosystem II reaction center protein B |
| 6.48074 |
Ahg925544 | acetyl-CoA carboxylase carboxyl transferase subunit beta |
| 8.60233 |
Ahg475560 | photosynthetic electron transfer A |
| 8.7178 |
Ahg952678 | Cytochrome C assembly protein |
| 10.4881 |
Ahg475585 | ribosomal protein S16 |
| 12 |
Ahg925461 | photosystem II reaction center protein E |
| 12.49 |
Ahg925492 | |
| 12.8452 |
Ahg925462 | photosystem II reaction center protein J |
| 13.2665 |
Ahg952680 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L |
| 15.8745 |
Ahg925489 | ATP synthase subunit C family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|