Detail



ID : Ahg922250

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922250|scaffold_103531.1
Sequence
CAAAATTTGC TTCGAGAAGA AAATGAATGG TGTTTCTCGT TATCTTCGAG CTTCTTCACT TCCGTCGTTG ATTCGCAGCT ATGGTGGAAT CAATTCGGTC TGTCGATTTT CGTCTCAATC TGATGGCTTC TCTGGAGGGA GATTCAGAGA GCAAGGGCCA GTTCCTGGAG ACTCTGCAAA TAATTCAGGT TTACCAAACA CGGGAAGATT CGGTTCCCCT TCGGAGCCTA ACCCTCCGAC TCTGAGAACT TTCGGTGATA TGAAAGCAGG CTTGTTAAAC AGAGGAGTAA ACGGTTTCTC GGCTCCTAAT GCTCCTCCTA CCTTCAAAAA TTCACTGAGA TCAAGATTAC CTAACTCCCT ACCTGATCAG TTCAGTCAGA CGAATCCAGG CTTACCAAAC ACTGGAGGAA GTGGATTCTC TGCTCCTAGT GTATCAAGCT ACGAGAATTT CACTCAATCT TCACTTCTCA ATGAGAATCC CCGCAGTGGA GGGAAGTCAA GCGACCTGGA TTTTGTTAGA GAAGTAATAG AAGATGAAGG AAGGAGAACC TCAGGGATAT TCTCTCATTT CCATCGCCCA AACCTCGAAA CGAATGCTGA CATCATTCAC ATCAAGATGT TGCGGAACAA CACTTTTGTC ACGGTTACAG ATTCCAAAGG AAACGTCAAA TGCAAAGCAA CATCCGGTAG TTTACCCGAT CTGAAAGGTG GACGGAAGAT GACAAATTAC ACAGCTGATG CAACCGCAGA AAACATTGGG AGAAGAGCTA AGGCTATGGG ACTGAAATCT GTGGTTGTTA AGGTTAACGG ATTTACACAC TTCGGGAAGA AGAAGAAAGC CATTATTGCG TTTAGGGACG GTTTCACCAA CTCTAGGTCT GATCAGAATC CGATAGTGTA CATCGAGGAC ACGACTAGGA AAGCTCATAA TGGTTGCAGA TTACCAAAGA AACGTCGGGT GTGAAAAGAA AACATCGCAT GTCCT 
Length985
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10394699.. 10396216
Download Sequence
A.thaliana
AGI-codeAT1G31817.1
DescriptionRibosomal L18p/L5e family protein
TAIR curator summary
Alias[NFD3][NUCLEAR FUSION DEFECTIVE 3]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg948905 Protein of unknown function (DUF565)
16.3707 Ahg475757 cytochrome c oxidase 15
17.4069 Ahg888940 Tetrapyrrole (Corrin/Porphyrin) Methylases
21.7256 Ahg925613
25.4951 Ahg942150 peroxin4
28.6182 Ahg496595
32.2955 Ahg949231 B-box type zinc finger protein with CCT domain
43.0813 Ahg927712 Pentatricopeptide repeat (PPR) superfamily protein
45.9891 Ahg920008 endonuclease/exonuclease/phosphatase family protein
50.8331 Ahg892739 nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression