| Annotation |
|---|
| Description | jgi|Araly1|925684|scaffold_201245.1 |
| Sequence |
TTTTGTTGTA GAGAGAAAAC ACAATGCCTG AAGGGAAATT GAGATCAGGA GTTTATAGAT CATTTATAAT GTGTGATGAT CCAAGAGATG TTGTGGATTG TGGAGCTATT AAGAAACAGA GTAAGAGCCG TAGTACTAAA CAACTTTATG ATCGTTCGAA TGCACCCAAA TTTGGAAACT CGGATTCGCA ATCACAAGCT CCTCCTCCTC CTTCCAGAAC CAAACCTGAG CAAGTTGATC CGTCGCGTGA GCATATGAGA AGCCGAGAAG AGAGCGAGTT GAAGCAGTTT GGTGATGCTA GTGGTTCATC AAATGAGGCT GCTAACAAAA GACAAGGAAG GGCTTCTCAG AACAGTAGTA ATTATGACAA GTCACTGTTG CATAAGAATT CATATGATGG CACTGGAAGA TCCAAGCCTA AACCTGCCAA CCTTAGAGCT GATGAAAGCA TGGGAAATGT GCACAAAGCT TGCAACACGA GAGCGATCAA TTTGACGAAT GTCAACACAA AAACATGTTC ACATTCTTTT GTTGGTAAGT CGCTTTCATA CGTTTAGTTC TTCCAATATC AAGACTT |
| Length | 577 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 9465783.. 9467041 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT3G25070.1 |
| Description | RPM1 interacting protein 4 |
| TAIR curator summary | Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. |
| Alias | [RIN4][RPM1 interacting protein 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg496902 | AP2/B3-like transcriptional factor family protein |
| 7 |
Ahg897957 | |
| 10.7703 |
Ahg924973 | |
| 27.1109 |
Ahg920819 | Zinc finger, C3HC4 type (RING finger) family protein |
| 29.1204 |
Ahg905323 | eukaryotic translation initiation factor 3 subunit C2 |
| 30.1662 |
Ahg489252 | |
| 33.4963 |
Ahg908321 | Transmembrane amino acid transporter family protein |
| 36.0278 |
Ahg495315 | FBD, F-box and Leucine Rich Repeat domains containing protein |
| 36.7287 |
Ahg905451 | selenium-binding protein 3 |
| 38.3406 |
Ahg942175 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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