Detail


ID : Ahg905323

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905323|Al_scaffold_0003_2451
Sequence
ATGTATCGTT TACAGGGTGG AAGTGAAAGT GAAGATGAGA GTGATTTTGA AAAAGAGGTT GAGAGTAACA ACATTCGTTA CCTTGCAGAC CTACCTGACG GTGAGTTTTG TTGTTGTATG GATACAAAAC GTGTGGTTAA GCCAAGAAAA GATAAATGTT TTGAAGAGAT GACCAACACT ATAGAGAATA TGAAGCATGC CATGAACATC AATGATTGTG TTTACTTGCA AGAAACGTTT GAGAAACTCA ACAAACATCT TGAGAAAGTT ATGAAGATTA CTAAGTCTGT GAAGGCGCCG ACTTTGTATA TCAAAACCCT TGTGTTGTTG GAAGATTTCT TGAATGAAGA TAAAGTAAGA AAGATGAGTA CTAGTAACTC CAAGGCTTTT AACTCAATGA GACAGAAACT GAAGAAGAAC AATATGCAGT ACCAAGAAGA TATCAATAGG TTTAGGGAGT CTCCAGATAT CGAGGACGAT GATGAGTATG AAGAGGAGGT GGAGGAATCT ACTGATGATA ATGTTTCTTG GGAGATGTTG TTTAGTTTAG ATCATGAAGT GATAACTTGG AACATGGTCA ACAAGAAGTT CAAAGAAATT ATGGCTGCTC GTGGGAGTAA AAGAAGAAGT GCTAGACTTA AACTCAAAAC TGGCGAGACT CACGCGGATA AGCTTATGGA CTTGACAAAG ATTGCCAAGA CTCCTGCACA GAAGCTTGTA ATCTTGTTTA GCGTTATTTC AGCAGAGTTT GGTGGTCTCA GCGAATACAT GCCTATCGAT GTCTGGAAGA AATGTGTGGT TAACATGCTT ACCATACTTG ACATTATTGT CAAGTACTAT AACATTAATG TTGTGGATGA TACCGCTGAA CCTGATGAGA AGGAAACTTC AAAGCCAGTG GATTACGATG GAACAATTCG TGTCTCGGGG AATTTGGTTG CATTCTTAGA GAGGATTGAG ACAGAGTTTT TCAAGGGTTT GCAGTGCATA GATCCTCACA CCAATGAGTA TGTAGAGAGA TTGAAAGATG AGCCTATGTT CTTGGCTCTT GCTCAGAAAA TCCAAGACTA CTTGGAGCGG AGCGGCGATT ACAAAGGTGC TTCAAAGGTA GCCTTAATAC TAGTTGAGTC AATCTATTAC AAGCCTCAAG AAGTTTTTGA TGCTATGAAG AAAATGGCTG ATGAAGAAAT TGAGGAGGGC AAAGAAAGTG GACCTACTTC ACAGATTGTT CCTCGTAAGC CTACCTTCGC AGGGAGCAGC CGCGCTATGA TGGATACACT CATATCCTTT ATCTACACAA ATGGAGATGA AAGGGCCAAA TCCAGAGCAA TGCTATGTGA TATCTATCAA CATGCTTTAA TGGATAACTT TGTGACTGCT AGAGACTTGT TGTTGATGAG TCATCTACAA GACAACATTC AACACATGGA CATTTCAACA CAGATTCTCT TTAACAGGAC AATGGCACAA CTTGGTCTTT GCGCCTTTCG GGTTGGAATG ATAAATGAGT CACATAGCTG CCTCTCTGAG CTGTACTCTG GTCATAGAGT GAGGGAGTTT CTCGGCCAAG GTGTCTCGAA AAATCGAGAC CACGAGAAGA CAACAGAGCA GATTCTAATG GAGAGGAGAA GACAAATACC GTACCACATG CACATAAACC TCGAGCTCTT GGAGGCTGTT TATCTTACTT GTGCCATGCT ACTTGAAGTC CCAAACATGG CAGCAAACTC GCATGATGCC AAACACAAAT CGGTTAGCAA GAATATTTGT CGCCTGCTCG AGATCAGTGA GAGGCAAGCG TTCACTGCAC CGCCTGAAAC TATACGTGAC CATGTCATGG CAGCAACCAG AGCCTTGACC AAAGGGAAAT TCCAAGAAGC GTTTTCAGTT TTGAACTCTC TTGATGTCTG GAGACTGTTC AAGAACCGCG ACAGCGTCCT CAATATGGTG AAAGCTAGGA TCAAGGAAGT GGCTCTAAGG ACTTATCTAT TCACATACTC AAGCTCCTAC TATAAGTCAT TAAGTCTTGA TGAGCTAGCC AAAATGTTTG ACATCTCTGA GTCACAGGTC CATAGCATTG TGAGCAAGAT GATGATCAAC GAGGAGCTTA CTGCAAAATG GGACCAGCCA ACTCAGTGCA TCATCTTCCA TGAAGTGCAA CATAACAGAT TACAATCTTT GGCTTTTCAG ATAACCGAAA AGCTCTCTAC TTTAGCAGAA AGCAACGAAA GTGCAATGGA GTCTAGAAAT GGTGGTGCTG GTCTTGATAT GAGTTCAAGG AGGAGGGACA ACAGTCAGGA CTATGCAGCA GCAGCATCAG GAAACAGAGG TCTGCAAATG GATGGCTCAA GTCTTACCCG AGGCGTTTCT GCGTAA
Length2376
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9641268.. 9643716
Download Sequence
A.thaliana
AGI-codeAT3G22860.1
Descriptioneukaryotic translation initiation factor 3 subunit C2
TAIR curator summarymember of eIF3c - eukaryotic initiation factor 3c
Alias[ATEIF3C-2][ATTIF3C2][EIF3C-2][TIF3C2][EUKARYOTIC INITIATION FACTOR 3C-2][eukaryotic translation initiation factor 3 subunit C2]
Gene coexpression
MR
MR Locus Description
14.0712 Ahg894540 protein kinase family protein
24.2487 Ahg904078 glutaredoxin-related
25.8457 Ahg919859 P-glycoprotein 10
29.1204 Ahg925684 RPM1 interacting protein 4
35.7491 Ahg900378
56.8771 Ahg927998
58.1206 Ahg490396 P-glycoprotein 5
73.0069 Ahg358487 Protein with RING/U-box and TRAF-like domains
73.0205 Ahg905664
74.108 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression