Detail



ID : Ahg927993

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927993|scaffold_300450.1
Sequence
ACGCTCACTT CTATACAGTC CATGTTGTCG GAATTTCAAA GAACCTGGGA TTCAAATATA GCTTTGGAGC ACTCTTCTCT TCTCCAGATG GACGAAAATG GCGGTTTCAG CGGAGGAGCT GTTAACTTCT CTGAGCTGGA TGCAAAAAAG CGATCTTTAA CACTTCTCGC TGAGCTTGGA AAGTGTCTCT GGGATTTCAC CTGGGAGGTT AGATCTTTGA TTGATCGGGT AGATTTTTGT GAATCTGAGG CTGAAGCATC TCTTGAATTT TTACTGAATG AAGCCAATGT GACGATTATT AGTGCTTTTC TGGTTTTTTT GAGAGTTAAA GGAGAGACTT TTGAAGAAAT GAGCTTCTCG TGTGAGTTAT TGTTTGTGAA ACTTTATTGT GATAGAGTAG AATTACAGCC AGTTGGCCTT GTGAACTTAG GGAACAGTTG TTATGCAAAT GCTGTCCTTC AGTTCTTGGC ATTCACTGGC CACTTATATC ATACCCTATT AGGGGATTAC ACTCTAATAA CATGTAAGCT GCACACCAAA ATGATTTTAC TGCTCTTATT GAAACTATGT GGGATTTCCC AAATTCGTAT TCCTATAGTG TTCTTTCTTC GATTGAAACC TGCGACTTGA GGACATGGAT TCTTTTTTTT 
Length650
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G65450.1
Descriptionubiquitin-specific protease 17
TAIR curator summaryEncodes a ubiquitin-specific protease.
Alias[UBP17][ubiquitin-specific protease 17]
Gene coexpression
MR
MR Locus Description
7.14143 Ahg905680
13.3417 Ahg929852
16.9706 Virus3962
23.4947 Virus1529
23.7487 Ahg898237 D-galactoside/L-rhamnose binding SUEL lectin protein
24.6982 Ahg353787
25.3969 Ahg922977 Coiled-coil domain-containing protein 55 (DUF2040)
25.807 Ahg335493
28.3901 Virus0392
35.2846 Ahg337754 gamma histone variant H2AX
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression