Detail



ID : Ahg929099

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929099|scaffold_301556.1
Sequence
CTTTGTTGAA GACGGCGGAG ATGATGTCAT GTGGTGTGAA GAAACCTGTT TCGAAGAAAA CAACGCCGTG TTGCACGAAG ATGGGGATGA AGAGAGGACC ATGGACGGTG GAGGAGGACG AGATTCTTGT GAGCTTCATA AAGAAAGAAG GTGAAGGACG GTGGCGATCG CTTCCTAAGA GAGCTGGTTT ACTCCGATGT GGAAAGAGCT GCCGTCTTCG GTGGATGAAC TATCTCCGAC CGTCGGTTAA ACGCGGCGGA ATTACGTCGG ACGAGGAAGA TCTCATCCTC CGCCTTCACC GCCTTCTAGG CAACCGGTGG TCACTGATCG CTGGAAGGAT ACCGGGAAGG ACTGATAACG AAATTAAGAA CTATTGGAAC ACTCATCTTC GTAAGAAACT TTTAAGGCAA GGAATTGATC CTCAAACCCA CAAGCCTCTT GATGCAAACA ACGTCCTCAA ACAAGATGAA GAAGTTTCCG GTGGACAAAA CCCCATAGAG CCTATTTCTA GTTCTCATAC CGATGATACC ACCGTTAATA GCGGGGATGG AGATAGCAAG AACAGTATTA ATGTCTTTGG TGGTGAAAGC GGCTACGAAG ACTTTGGTTT CTGCTACGAC GACAAGTTCT CATCGTTTCT TAATTCGCTT ATCAACGATG ATGCTGATCC TTTTGGTAAC ATTATGCCAA TATCTCAACC GTTGCAGATG GATGATTGTA AGGATGAGAT TGTTGGAGCG TCGTCATCTA GCTTAGGACA TGACCTGCAG AGACAAGAAG ATATATAGTT GATCGAATCT TGATGTCTT 
Length809
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5216086.. 5217363
Download Sequence
A.thaliana
AGI-codeAT3G13540.1
Descriptionmyb domain protein 5
TAIR curator summaryEncodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).
Alias[ATMYB5][MYB5][myb domain protein 5]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg925744
14.4222 Ahg917658 subtilase 4.13
16.6132 Ahg483920 Signal transduction histidine kinase
20.9762 Ahg352619
21.6333 Ahg490754 VQ motif-containing protein
23.8747 Ahg921700 ENTH/VHS/GAT family protein
24.6982 Ahg492079 seed storage albumin 3
27.2397 Ahg907632
27.3496 Ahg325337 response regulator 21
29.4279 Ahg922132 WRKY DNA-binding protein 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression