Detail



ID : Ahg325337

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325337|fgenesh1_pm.C_scaffold_6000557
Sequence
ATGGCTTTTG CTCAATCTTT TCACAACCAA AGCTCTATCT TGAGAATCAA TGTCATGGTT GTGGACGACG ATCGTGTTTT CCTTAATATT TTGTCACGCA TGCTTGAGAG GTCCAAATAC ATAGATCCAT CGGTTATGAA GATCACAGTT GTAGCGGTAG ACGATCCAAA GAAAGCATTA TCTACACTAA AAATTCAACG AGACCATATA GATCTCATAA TTACAGATTA TTACATGCCT AGCATGAACG GTCTACAACT CAAAAAACAG ATTACTCAGG AATTTGGAAA TTTACCGGTC TTAGTTATGT CATCGGACCC CAACAAAGAA CAGGAGAGTT TAAGTTGTGG AGCGATGGGT TTCATTCCAA AACCCATAGA ACCAGCTGAC TTAACAAAGA TTTACCAGTT TGCTTTAACC TACAAGATGA ACGGTAAGTC AACATTATTG ACCGAGCAAA ACCACAAGGA TGCAAATGTT AGTGTCCCTC AGCAAATCAC GTTGATTCCT GAGCAAGCTA ACGTCTTAAA GACCAAGAAG AAGAACTGCT CATCTAAATC GGATTCAAGA ACCGTGAACA GTACAAATGG AAGTTGTGTT AGTACGGATG GTTCAAGAAA AAATCGAAAA AGAAAACCCA ACGGTGGTCC TAGTGATGAT GGTGAATCTC TGTTGCAACC CGCCAAGAAG AAAAAGATTA CCTGGACGGA TTCTCTTCAC GACCTATTCT TACAGGCTAT CCGACATATC GGTCTTGATA AGGCGGTGCC AAAAAAGATC TTAGCGTTCA TGAACGTATC ATACTTGACA AGAGAGAACG TTGCCAGCCA TTTACAGAAA TATCGGATAT TCTTGAGGAG AGTCGCGGAT CAAGGTTTTT CAAGCATGTT GTCGGATAGA GGCATAGACT CGATGTTTCG ACAAACTCAC ATTAAGGAGC CGTACTTCAA CTGTTACACA CCCTTTACTT CTTGGTATGA CACAAGTCTT AACAATAGAT CATTCTATTC CAAACCCGGA CATGGCCTTG GACAGTCTAG ACTCTTGTCC AAAACACGTG AGCCCGTCCG CTTCAACCTG ATGCCTTACA ACTACATGAA CCGGTCATCC ACCTATGAGC CGCACCATAT AGGATCTGGA TCAAACTTGA CGCTGCCCAT CCAAAACAAC CTCAGTTTCC CAAACCAACC ATCTCAAAAC GAAGATATAA GAAGCTTTTT CGAACCACCG GCCGTGATGG CGAACAAAAT CGTCCAAACA TCTCAAGTTC TTGGGTTTGG ACAACTTGGA CCGTCAACTA TTAGTGGTAA TAATTTCAAC AATAACATGA TGAGTAGCTA TGGAAGTTTG ACTCCGAATC AACCGGGATC TAGCCACTTC TCGTATGGGA TGCAATCGTT CTTAAACAAT GAGAACGCAG CATGTAACCC TCAGCCACCT GCCAATGCAA CTACACAGCC AAATCTTGCT GAATTTCCTC AACTGGAGAA TCTCGACTTA TACAATGATC TCGGCCACAC TAGTGACCTT CCTTACAACA TAAGTAACTT TCAATTCGAT GACAACAAGC AGCAACAAGG AGAAGCGGAT TCCACCAAAT TTGATCTCCC TGCAAATTCT TCGACTGAAC TGAATCAGAT TTTGTCTCTT GAAGACAATG GTGACTGGAC CTTCGCGAAC GTAAACCAGG CTCAATCTAA TGGAGAAACA TCGAACACTA TTGCTGCTCC GGAAACTAAT CCTCCAATTT TCAACATGAA CCCTAATCAG AATCAGGGAC AAGATGTTCC AGAGTTTACC GATTGGTCGT TTTTGGATCC GCAGGAATTG GTTGATGACG ACTTCATGAA CTCTCTGTTC AACAATGACA TGAATTGA 
Length1878
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2663050.. 2666893
Download Sequence
A.thaliana
AGI-codeAT5G07210.1
Descriptionresponse regulator 21
TAIR curator summarymember of Response Regulator: B- Type
Alias[ARR21][RR21][response regulator 21]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg931779 glycine-rich protein 2B
8.7178 Ahg351608 Protein of Unknown Function (DUF239)
10.0995 Ahg904884 RNA-binding protein
11.1355 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.4164 Ahg949069 transposable element gene
14.4568 Ahg916260
17.6635 Ahg937108
22 Ahg943128
22.3607 Ahg484455 AP2/B3-like transcriptional factor family protein
23.3024 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression