Detail



ID : Ahg929736

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929736|scaffold_302193.1
Sequence
CAAAACTCCC CTAAAAAGAC ATGAACAACA ACACTTTCAG TACTCTTACC ACCATCAATG ACGACTACAT GTTATTCCCT TATAATGACC ATAATTCCTC ACAGCCATTG CTCCCTTTTA GCCCTTCTTC TTCCATTAAC GATATCTTGA TTCACTCCAC ATCAAACAAT CATCATCATC AATTCCTACA ACCTTCTCCT TTTTCTCAAT TCGAATTTGT CCCGGATTGT GCCCTCCTCA CCACTTTCAA CCCACAAAAC AATGGCCATG ATGATAACCA AACCATCCCC AACGACAATC ATCATCCATC ACTTCACTTT CCCTTGAATA ACACCATTGG AGACCAGCCC GCTGAGCCCT CGGAAACTAT AACCCACATA GAAGATTCCC AGAGAATCTC AGACCCAAAA ATGAAAAAAG TCAAGAAACC AAGCAGAACG GACAGGCACA GCAAGATCAA AACGGCCAAA GGGACAAGAG ATCGTAGGAT GAGACTCTCG CTAGATGTCG CCAAAGAGTT GTTTGGCTTA CAAGACATGC TTGGATTCGA CAAAGCCAGC AAAACCGTTG AATGGTTGCT CACACAAGCG AAACCCGAGA TAATAAAGAT CGCCAAAACC CTTTCTTACC AATGCAGCTT CAGCAGCGGC GACGAGTCTC ATACCCGACC GGAGTTAAGA TCCATGGACA CATCATCTGA TCTATGTGAA CTTCCATCAA TGTGGACGGT CGACGATAGA GGCAGCAATA CTAACACGAC CGAAACAAGA GGAAACAAGG TAGACGGTAG GTCAATGAGA GGGAAGAGAA AGAGGCCAGA ACCGCGAACG CCCATTTTGA AGAAGTTGTC CAAGGACGAG AGAGCGAAAG CAAGAGAAAG AGCAAAGGAT AGAACAATGG AGAAAATGAT GATGAAGATG AAAGGAAGAT CACAGTTAGT AAAAGTTGTG GAAGAAGAAG CTCATCATCA TGGTGAGATC ATGAAGAATA CTATTAGCGA AGTGAATCGG AATTCTTTTG AGATGTCACA CTGCGAAGAC GAGATCGAAA AACTTTGCAA GAACGATCGA TTTGCAGTTT GCAACGAATT TGTCATGAAT AAGAAAGATC ACATTTCAAA CGAATCTTAT GACATAGTCA ACTACAAATT GAACTCATCA TTTCCAGTGA TTAATCACCA CCGCAGCCAA GGAGCAGCTA ATTCTATTGA GCAGCATCAG TTTACGGATC TTCATAACTC CTTGGTGGCG AAACCAGACC TCATGTACAA CTATCAAAAC ATGTATTGAT AGTGATTTAC CATTAATATC 
Length1310
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7500007.. 7501875
Download Sequence
A.thaliana
AGI-codeAT3G18550.1
DescriptionTCP family transcription factor
TAIR curator summaryEncodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.
Alias[AtBRC1][ATTCP18][BRC1][TCP18][BRANCHED 1]
Gene coexpression
MR
MR Locus Description
20.9762 Ahg944327 zinc finger (C2H2 type) family protein
37.081 Ahg334275 oligopeptide transporter 2
38.6005 Ahg494865 Pectin lyase-like superfamily protein
41.3159 Ahg919859 P-glycoprotein 10
59.925 Ahg495525 Protein of unknown function (DUF295)
60.564 Ahg921700 ENTH/VHS/GAT family protein
71.2461 Ahg901222 homeobox-3
74.5989 Ahg950383 Auxin efflux carrier family protein
80.4487 Ahg486927 cation exchanger 4
86.5159 Ahg485352 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression