Detail



ID : Ahg930355

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930355|scaffold_302812.1
Sequence
CCTTAGATTA TCAGATCTTG ATATCATGGA TCCTATTCTC GGCTTTATGG GCACAACAAA CATGTCACAT AACACAAACC TTATGATCGC CGCTGCAGCC ACAACCACCA CCACCTCCTC GTCTTCCTCT TCTTCCTCCG GCGGCTCGGG GACTAACCAG CTGAGCAGGT ATGAGAATCA GAAGAGAAGA GATTGGAACA CTTTCGGACA ATATCTCCGC AATCACCGTC CACCACTTTC TCTCTCCCGT TGTAGTGGTG CTCATGTTCT TGAATTCCTC AGGTACCTCG ACCAATTCGG CAAGACTAAG GTTCACACAC ACCTATGTCC GTTCTTCGGG CACCCAAACC CACCAGCACC ATGTGCCTGT CCACTCCGAC AAGCGTGGGG TAGCCTCGAC GCACTCATTG GTCGTCTTAG AGCCGCTTTT GAAGAGAACG GTGGTTCTCC AGAGATGAAC CCTTTTGGTG CACGAGCCGT TCGACTCTAC CTAAGGGAAG TGCGTGACTC GCAGGCTAAA GCACGTGGAA TCAGCTATGA AAAGAAGAAG CGGAAGCGAC CTCCCCCGCC GCTACCACCG GCTTAGCCGG CGATTTCAAG TAGCCCTAAT TAGCACTAAG TCATGAGAAA AATGTTT 
Length637
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10009483.. 10010595
Download Sequence
A.thaliana
AGI-codeAT3G23290.2
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH4][LIGHT SENSITIVE HYPOCOTYLS 4]
Gene coexpression
MR
MR Locus Description
31.5278 Ahg351609 Protein of Unknown Function (DUF239)
40.1995 Ahg323966
42.7083 Ahg359114 transposable element gene
42.72 Ahg888801 Transducin/WD40 repeat-like superfamily protein
54.111 Ahg942510 transposable element gene
60.8851 Ahg946872 Protein kinase superfamily protein
63.5531 Ahg905690
63.6396 Ahg904884 RNA-binding protein
65.1767 Ahg942130 Leucine-rich repeat (LRR) family protein
77.5629 Ahg945592
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression