Detail



ID : Ahg930701

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930701|scaffold_303158.1
Sequence
TTGTGAATGG AAATAGGTGT TATATATGGA GAATAATAAG ATAGTACATA AAGAGACATC AAAGATTAAG TCGTTGAGCA ATGGAGAGGT TTTAGTGGAG AAACGAGGAG TGTCAGTTTT GGAGAATGGA GGTGTTTGCA AGATTGATCG TATGACAGGG CTAAAGTTCA AGCGCCGGAA TGTTTTTGCT GTGAGGGATT TCCCACCGGG TTGTGGGACC GGTGTGGAGC GGTTTGGATT GAGAAAAATG GAAGATGAAG AAGAAGAATT TGAAGATGAA TGAGTTTTAT AATTATGAGA TATT 
Length304
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12129169.. 12129472
Download Sequence
A.thaliana
AGI-codeAT2G22740.2
DescriptionSU(VAR)3-9 homolog 6
TAIR curator summaryEncodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.
Alias[SDG23][SUVH6][SET DOMAIN PROTEIN 23][SU(VAR)3-9 homolog 6]
Gene coexpression
MR
MR Locus Description
1 Ahg932867 SU(VAR)3-9 homolog 6
3.16228 Ahg937726 Cysteine proteinases superfamily protein
6.16441 Ahg906202
7.48331 Ahg916302
9.48683 Ahg940645
10.8628 Ahg927229 general regulatory factor 13
11.0454 Ahg891407 NOD26-like intrinsic protein 4;2
17.0294 Ahg934165 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
17.2337 Ahg951744
18.9737 Ahg479587 non-race specific disease resistance protein, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression