Detail



ID : Ahg932867

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932867|scaffold_400855.1
Sequence
TTGTGAATGG AAATAGGTGT TATATATGGA GAATAATAAG ATAGTACATA AAGAGACATC AAAGATTAAG TCGTTGAACA ATAGAGAGGT TTTAGTGGAG AAACGAGGAG TGTCAGTTTT GGAGAATGGA GGTGTTTGCA AGATTGATCG TATGACAGGG CTAAAGTTCA AGCGCCGGAA TGTTTTTGCT GTGAGGGATT TCCCACCGGG TTGTGGGACC GGTGTGGAGC GGTTTGGATT GAGAAAAATG GAAGATGAAG AAGAAGAATT TGAAGATGAA TGAGTTTTAT AATTATGAGA TATT 
Length304
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5731612.. 5731915
Download Sequence
A.thaliana
AGI-codeAT2G22740.2
DescriptionSU(VAR)3-9 homolog 6
TAIR curator summaryEncodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.
Alias[SDG23][SUVH6][SET DOMAIN PROTEIN 23][SU(VAR)3-9 homolog 6]
Gene coexpression
MR
MR Locus Description
1 Ahg930701 SU(VAR)3-9 homolog 6
1.41421 Ahg933049
10.9545 Ahg947719
16.9706 Ahg931408
19.1833 Ahg351658 Fasciclin-like arabinogalactan family protein
26.4953 Ahg925500
28.9828 Ahg948966
34.7851 Ahg921171 Plant thionin family protein
38.8844 Ahg935971
40.2492 Ahg906233
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression