Detail



ID : Ahg930812

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930812|scaffold_303269.1
Sequence
GTTTCTTACT TGCTTATTTG TGATGGAAAA TGTAAGAGGT TCGAGACACA ATCTGAGAGA AGTGGAAACA ATAATGTTGA AGCCATTGCC AGAGATAGCT GAGAGTATCG ATGATGCTAT CTGCCATGAA CTCTCCATGT GGCCTGAAGA GGCTAATGAT TTGTTGTTGA TAGTGGAGGC AATATCAAGG GGAGACTTGA AATTGGTACT GGTTGCTTGT GCAAAAGCTG TTTCTGAGAA TAATCTTCTG ATGGCACGAT GGTGTATGGG AGAGTTACGC GGTATGGTTT CGATTTCTGG TGAGCCAATC CAGAGATTGG GAGCTTACAT GTTAGAAGGG CTTGTGGCAA GGCTTGCTGC CTCTGGTAGT TCGATATACA AGTCTCTTCA ATCCAGAGAA CCGGAGAGTT ATGAATTTTT ATCTTATGTG TATGTTCTGC ATGAGGTTTG CCCATATTTC AAGTTTGGAT ACATGTCAGC GAATGGTGCG ATCGCAGAAG CAATGAAGGA TGAAGAGAGA ATCCACATTA TTGACTTCCA AATTGGGCAA GGGAGCCAGT GGATTTCACT GATTCAGGCT TTTGCAGCTA GGCCTGGTGG GGCTCCAAAT ATTCGAATTA CCGGAGTCGG TGATGTATCC GTCTTGGTTA CAGTCAAGAA AAGATTAGAG AAACTTGCAA AGAAGTTTGA TGTCCCATTC AGGTTCAATG CGGTTTCAAG GCCAAGTTGT GAAGTTGAAG TGGAAAATCT TGATGTCCGA GAAGGCGAAG CCCTTGGAGT GAACTTTGCT TACATGCTGC ACCATTTGCC AGATGAGAGT GTAAGCATGG AAAACCACAG GGACCGGTTG TTGAGGATGG TGAAGAGTCT ATCACCTAAA GTAGTCACTC TTGTGGAACA AGAATGCAAC ACGAACACTT CCCCTTTCCT TCCTAGGTTC CTTGAGACAT TAAGTTATTA CACAGCAATG TTTGAATCTA TCGATGTGAT GCTTCCGAGA AACCACAAGG AAAGGATCAA TATCGAGCAG CACTGCTTGG CAAGGGATGT CGTCAACATC ATAGCTTGTG AAGGAGCTGA GAGGATTGAA AGACACGAGC TTCTCGGAAA ATGGAAGTCA AGGTTTTCCA TGGCAGGTTT TGAGCCATAC CCCTTGAGCT CAATCATTTC AGCCACCATT AGAGCCCTCT TGAGAGATTA CAGCAACGGG TATGCGATTG AAGAAAGAGA TGGTGCTCTG TACCTTGGTT GGATGGACAG AATCTTGGTC TCATCTTGTG CATGGAAGTG AAAGAATAAA TGTCTCCGAG AATG 
Length1314
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12736596.. 12737909
Download Sequence
A.thaliana
AGI-codeAT2G04890.1
DescriptionSCARECROW-like 21
TAIR curator summaryEncodes a scarecrow-like protein (SCL21). Member of GRAS gene family.
Alias[SCL21][SCARECROW-like 21]
Gene coexpression
MR
MR Locus Description
19.8746 Ahg892895 Splicing factor, CC1-like
25.3772 Ahg471422 phloem protein 2-A12
38.223 Ahg949730 pfkB-like carbohydrate kinase family protein
47.3709 Ahg478095 CONSTANS-like 9
52.7447 Ahg494798 Galactose oxidase/kelch repeat superfamily protein
53.2165 Ahg910238 callose synthase 1
53.3854 Ahg938312 FKBP-type peptidyl-prolyl cis-trans isomerase family protein
57.0614 Ahg895336
64.622 Ahg474968 E3 Ubiquitin ligase family protein
85.2526 Ahg489855 co-factor for nitrate, reductase and xanthine dehydrogenase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression