Detail



ID : Ahg474968

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474968|fgenesh2_kg.2__98__AT1G63900.1
Sequence
TGAGAATATT GAGAGAGATC GAAGCAAAGG ATCATTCAAA TCCAACACTC TGAATCTTTT CTTTCACTGC TTCTAGTGTC TAATTCTTCA AACTCTTCCT CGATTCATAC TCATAGCTCT CGTTAGCTAA TTTCTCATGA TCTTCTTCCA TCGCTCTGTA TTCTAATCCA GATTCGTATG CTCTCATCTC TATTTCATTC AATTTCACTC ATCCAGATTC GACCATTACC TCTATCTCTC TACTCATCAA TCACTTCAAA GGTATTGTTC TTCTTCTTCA AACAAGTAAG AGTGACTTGA GAGTCTGATG ATTCCTTGGG GTGGAGTTAC TTGCTGCCTC AGCGCCGCCG CTCTTTATCT TCTCGGCCGG AGTAGTGGCA GGGATGCTGA AGTACTCAAA ACTGTCACTA GGGTTAATCA GCTCAAGGAG TTAGCTCAAT TGCTAGAATT AGATAGCAAG ATTCTGCCTT TCATTGTTGC GGTATCAGGA AGAGTCGGCT CTGAGACACC TATCAAGTGT GAGCATAGTG GCATTCGCGG TGTTATTGTT GAAGAAACGG CTGAACAACA TTTTCTGAAA CATAATGAGA CGGGTTCTTG GGTGCAAGAT AGTGCATTGA TGTTATCAAT GAGCAAGGAG GTTCCTTGGT TTCTGGACGA TGGGACAAGT CGTGTCCATG TAATGGGAGC TCGTGGTGCC ACTGGTTTTG CCTTGACTGT TGGAAGTGAA GTATTTGAAG AGTCAGGGCG GTCGCTTGTA CGAGGAACAC TTGATTATCT TCAAGGACTT AAGATGCTTG GAGTAAAGCG CATTGAGCGT GTTCTTCCAA CTGGAATACC ACTAACAATT GTTGGTGAGG CTGTCAAGGA CGATATTGGC GAATTCAGGA TTCAAAAACC TGACAGGGGA CCTTTCTACG TCTCTCCTAA ATCACTCGAT CAGCTCATTT CTAATTTGGG AAAATGGTCA AGGTGGTACA AATATGCCTC CATGGGTTTT ACTGTTTTTG GTGTGTTCCT AATTACGAAG CATGTCATTG ATTCTGTTCT AGAGAGAAGA CGGCGGAGAC AGTTACAAAA AAGAGTGCTT GATGCAGCAG CAAAGAGAGC TGAGCTAGAG AGTGAAGGTT CAAACGGGGC ACGTGAGAGC ATTTCAGATT CTACCAAGAA AGAAGACGCT GTTCCTGATC TCTGTGTGAT ATGCCTAGAG CAGGAGTACA ACGCTGTGTT TGTCCCGTGT GGTCATATGT GCTGCTGCAC TGCATGCTCC TCCCACTTGA CCAGCTGTCC ACTTTGTCGG AGACGAATAG ATCTGGCGGT TAAGACATAT CGTCACTGAA CAACAACTCA GGCTTCCGAA ACATTCTCTA CTCGAGTCTT GTCTGTAAAT ACCGCAAGAT GAAAACATTA CAGTTTAGGC GTTCAATCTC CCCTTTTGTT TGATTTCGAG AACAAAACAT TTTGAATTAT ATAGAAACAT AAGGTGTTTA CTCGATTTGC AGAACAGTAC ATTCGTGTTT ACTTAACCGT GTCGCTGCTA ATGCCATGAG GTG 
Length1553
Protein Sequence
Protein Residue
Map Locationscaffold_2: 555998.. 558570
Download Sequence
A.thaliana
AGI-codeAT1G63900.2
DescriptionE3 Ubiquitin ligase family protein
TAIR curator summary
Alias[DAL1][SP1][DIAP1-like protein 1][SUPPRESSOR OF PPI1 locus 1]
Gene coexpression
MR
MR Locus Description
10.247 Ahg476122 serine/threonine protein phosphatase 2A
13.4907 Ahg945284 GPCR-type G protein 1
14.6969 Ahg328915 binding
18.5203 Ahg496120 Ras-related small GTP-binding family protein
20.567 Ahg939245 SET domain protein 14
22.0227 Ahg493915 PQ-loop repeat family protein / transmembrane family protein
23.9165 Ahg942216 chloride channel D
24.1661 Ahg487123
28 Ahg489246 cleavage and polyadenylation specificity factor 100
29.9165 Ahg480622 associated protein 19
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression