Detail



ID : Ahg930873

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930873|scaffold_303330.1
Sequence
TATGTCAGAT ACAGTGCTAA ATGGGTAAGA AGAAGTCAGA CGAGATTGTT GCTATCAGGA ATGGGAAATA TACTTTTAAA GATTCGAAGA AGGAGAAAAT TTCAGTCCTA GCCATTCTTG CAAGCATGGA TAAGAAAGAT GATAAACCCA AGATCAATAA GGGCTCATCG TCCAGAGCCA AGACTGCTCT AAAAGTTTCG TCCTACACTG ATGACATAGA TTATCCTCCT AATCATGATC AAGAAGACGA AGACCAAGGC GTTTTTGCTG AGAAACAAAG ACAGATGCTT GCAATGAGCA ATCAGAAGGG CAAAGAAAAG AAACTCGATT TCTCTGTGAC TCCTAAGACA CAAATGAAGG CAAAGGGTAA TCAATTCTCC GCTCTCCTGG CTGCAGAGAT AGGAAAGAAG GAGGCCTTGA AGGACGACCA TGATGCATTC ACGGTTGTTA TGGGAAGCAA GACATCGGTG CTTGATGGAG AAGAAACAGG AGATGCGAAT GTCAAAGATA TTAAGATCAG TTCGTTTTCT GTCTCTGTTC GAGGGAAAGA GCTTCTCACG AATGCCTCTC TCATGATATC ACATGGGAAA AGGTATGGAT TGGTGGGCCC AAATGGAAAG GGTAAGTCTA CACTGCTCAA GCTTTTGGCA TGGAGGAAGA TTCCAGTTCC CAAGAATATT GACATTCTTC TTGTTGAGCA AGAGGTGGTC GGTGATGGAA AGAGTGCTCT GGAAACAGTT GTCTCTGCTA ATCAAGAGCT GTTTAGGTTA AGGGAAGAAG CTGCAGCTCT GGAGAACGAT GATGCTGATG GGGAAAAGCT TGCTGAATTG TATGAGAGGC TACATATGTT GGGGTCAGAT GCTGCTGAAG CGCAGGCTTC CAAAATTCTT GCGGGTTTAG GTTTCACAGA AGATATGATA GCGGGTGAAA CTAAGTTGCT CAGTGGTGGC TGGAGGATGC GAATATCATT AGCTAGAGCT CTCTTTGTGC GACCTACCCT TTTGTTGTTA GATGAACCCA CTAACCATCT CGACCTGAGA GCTGTTCTAT GGTTAGAAGA GTATCTATGC CGGTGGAAGA ATACGCTGGT TGTTGTTTCA CATGGAGTGG ACTTCCTCAA CGCTGTCTGC ACGGATATAA TACATTTGCA CGACAAGAGT CTCCACTTGT ATCGTGGTAA TTACGATGCT TACGAAACCG GATATCTTCA GCGACGTAAG GAGATGAACA AAAAGTCTGA GATTTTCCAG AAACGGATGG AAGCAGCTAA GAGGTCTGGA AACAGGGTAG AACAGGAGAA GGTAAAGGCC TGGGCCAAGC TTGCTGCAGC GAAAGAAGCA TCCAAGCGTA AGGCAAAGGG TAAGACGATG GATGACGAGG GCCCAGCACC AGAAGCTCCA AGGAAGTGGA GTGATTATAA GGTGGTGCTC GATTTTCCAG AACCAACCGA GCTCCCTCGT CCTCTTCTGC AGTTGATTGA GGTTAGCTTC TGCTACCCAA ACAAGTCAGA TTTCAGGCTC TCAAATGTGG ATTTAGGTAT AGATATGGGG ACACGAGTAG CAATAGTTGG GCCTAACGGA GCTGGAAAGT CCACTCTTTT GAATCTTATT GCGGGAGATT TAGTTCCGAC TGAGGGTGAA GTGAGAAGAA GCCAGAAGCT AAGAATCGGC AGGTACTCGC AGCACTTTGT TGACCAGTTA TCAATGTGGG AGACACCGGT TGAGTATCTT CTTCGTCTGT ATCCTGACCA AGAGGGATGT AGCAAACAAG AGGCGGTGCG TGCCAAACTG GGCAAGTTTG GGCTAACAGG TGAAAACCAT TCCACTCCAA CTGCGAAATT GTCTGGAGGA CAAAAGGCTA GGGTTGTGTT AACCTCAATC TCAATGTCGA AGCCACACAT TTTGCTTCTT GACGAGCCAA CAAATCACCT CGACATGCAG ACGATAGATG CCTTGGCGGA TGCACTAGAT GAGTTCAAAG GAGGAGTTGT GTTGGTGAGC CACGACTCGA GACTCATAAG CCGTGTCTGT GAGGACGAGG AGAAGAGTGA AATTTGGGTT GTGGAAGCCG GGACAGTGAC TTTCTTCCGA GGCACGTTTG AAGAGTACAA AGAAGAACTC ATAGGAGAAA TCAAAGCAGA GGTTGATGAG TTAACTTGTC TTGGCTGCTA AGGTGCTCCA CCTAAATAAA C 
Length2191
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13269846.. 13272036
Download Sequence
A.thaliana
AGI-codeAT3G54540.1
Descriptiongeneral control non-repressible 4
TAIR curator summarymember of GCN subfamily
Alias[ABCF4][ATGCN4][GCN4][ATP-binding cassette F4][general control non-repressible 4]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg490879 cytochrome P450, family 81, subfamily F, polypeptide 4
6.9282 Ahg917747 ferric reductase-like transmembrane component family protein
7.74597 Ahg351609 Protein of Unknown Function (DUF239)
10.583 Ahg323113 F-box/RNI-like superfamily protein
10.7703 Ahg925744
13.4164 Ahg917925 ABC2 homolog 16
16.1245 Ahg478955 Serine/threonine-protein kinase WNK (With No Lysine)-related
16.5831 Ahg316947 Pectin lyase-like superfamily protein
16.6132 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
17.8606 Ahg898260 cytochrome P450, family 71, subfamily B, polypeptide 31
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression