Detail



ID : Ahg931401

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931401|scaffold_303858.1
Sequence
TGTTCATTGA TCCTTTCAAG ATGGAGAAAG TGACCAACTC AGATTTGAAA TCCTCTGTTG ATGGTGGCGT TATTGATGTG TATGGAGAAG ATTCAGCCAC CATTGAGCAC AACATAACTC CTTGGTCTCT CTCTGTTTCT AGTGGATATT CATTGCTGAG AGATCCTCGC TACAACAAAG GACTTGCTTT CACTGAGAAA GAGAGAGAGA CGCACTACTT GCGTGGTCTT CTTCCTCCAG TTGTTCTTGA TCAAAAGCTT CAGGAGAAGA GGCTGATGAG CAATATCCGA CAATATCAAT TTCCATTACA AAAGTACATG GCTCTGACAG AACTTCAGGA AAGAAACGAG AGACTGTTTT ATAAGCTCTT GATAGATAAT GTTGAGGAGC TTCTTCCTAT TGTTTATACT CCAACTGTTG GTGAAGCTTG TCAGAAATTT GGAAGTATTT TCAGGCGACC TCAGGGTTTA TTCATCAGTT TAAAAGACAA GGGAAAGATT CTAGATGTGT TAAAGAACTG GCCTGAAAGG AATATACAAG TTATTGTTGT TACTGATGGT GAAAGGATCT TGGGATTAGG AGATCTTGGA TGTCAGGGGA TGGGTATACC GGTTGGTAAA TTGGCGTTAT ATTCAGCACT TGGAGGCGTT CGTCCTTCTG CGTGTTTACC TGTCACCATT GATGTGGGAA CAAACAATGA GAAACTGTTG AATGATGAGT TCTACATAGG ACTCAGGCAA AAGAGAGCAA CGGGACAGGA ATATAGCGAA CTCTTGAATG AATTCATGAG TGCTGTGAAA CAGAACTATG GCGAAAAAGT TCTTATTCAG TTTGAAGATT TTGCTAATCA TAATGCCTTT GAGTTGCTTG CAAAATACCG CGATACTCAT CTCGTCTTCA ACGATGATAT ACAGGGGACA GCATCAGTTG TTTTAGCGGG ATTAGTTTCC GCACAGAAGT TAACAAATAG TCCACTTGCA GAGAACACCT TCCTCTTTCT TGGTGCTGGT GAAGCTGGAA CTGGAATAGC AGAACTCATA GCTCTCTATA TATCAAAACA GATGAATGGT TCGGTAGAGG AAAGCCGCAA GAAAATCTGG CTTGTTGATT CCAAGGGACT GATTGTTAAC TCCCGCAAAG ATTCACTTCA AGCCTTCAAG AAACCATGGG CTCATGAACA TGAACCAGTC AAAGACCTCT TAGGTGCTAT CAAGGCAATA AAACCGACTG TTCTGATTGG ATCGTCTGGC GTTGGACGGT CTTTTACAAA AGAAGTGATA GAAGCCATGT CCTCCATTAA TGAGAGACCA CTGATAATGG CTCTCTCTAA CCCAACAACA CAATCAGAAT GTACAGCTGA AGAAGCTTAT ACTTGGAGTA AGGGTCGTGC CATTTTCGCA AGTGGAAGTC CTTTTGATCC AGTGGAGTAT GAAGGAAATG TGTTTGTATC GACACAGGCA AACAATGCGT ACATATTCCC GGGTTTTGGA CTTGGTTTGG TTATCTCTGG AGCAATACGG GTACATGACG ATATGCTTCT AGCTGCTGCT GAGGCATTAG CTGGACAAGT AAGCGAAGAG AACTATGAGA AAGGGATGAT ATATCCTTCA TTCTCTGCCA TCCGGAAAAT ATCAGCTCAT ATTGCAGCCA ATGTAGCAAC TAAGGCATAT GAACTAGGTC TGGCGGGGCG GCTTCCACGG CCGAAAGATA TAGTCAAGTG TGCAGAGAGT AGCATGTACA GCCCCACCTA CCGTCTCTAC CGTTGAAAGT TGAAACTCAA GTCTGT 
Length1786
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19658925.. 19662199
Download Sequence
A.thaliana
AGI-codeAT2G19900.1
DescriptionNADP-malic enzyme 1
TAIR curator summaryThe malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.
Alias[ATNADP-ME1][NADP-ME1][Arabidopsis thaliana NADP-malic enzyme 1][NADP-malic enzyme 1]
Gene coexpression
MR
MR Locus Description
20.664 Ahg483895 myb domain protein 2
46.669 Ahg474944 P-loop containing nucleoside triphosphate hydrolases superfamily protein
51.788 Ahg914348 Regulator of Vps4 activity in the MVB pathway protein
63.4271 Ahg470207 Polyketide cyclase/dehydrase and lipid transport superfamily protein
79.6367 Ahg892274 SGNH hydrolase-type esterase superfamily protein
80.0312 Ahg925969 Zinc-finger domain of monoamine-oxidase A repressor R1 protein
81.7802 Ahg319606 U-box domain-containing protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression