Detail



ID : Ahg931870

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931870|scaffold_304327.1
Sequence
GCTCTCTACT AGTCTCTTTC ATGGCGTCTT CTCATAAAGG AGCTGCAGGT GACTCAATGG GAAGCAGTAA AATGAGTTTT GATCAAAAGA GACAGCTTGT CTGGAAGCTG TCGAAAGAAT CCGAGAGAGC CTTCAAAGAA GTCTTGAAGG ACTGGAGCTG CAACGAGATT CGAGAGCTCT TACGTGCAGA ATCAGGGAAA TATATAAAAT ACACCGGTTT AACGAAAGAA GAGATCATCA TAAGGCTTTT CAACATTGTA TCAAAGAAAA ACACTGGAGG TTATGAGGTA GAAGAAGAGA GAAATCCATC ACCAAAAAGA CAGAGGAAAG ATCTTGATCC TTTGCACTAT GTGACTCCGT TAGCTAAAGC TAAAGGCAAG GGTACAATGT ATTGTCAGAA CTTGGCTTGC CAGGCTAAAC TAAGAGAGGA AGCCACTTTT TGCCAAAGGT GTACCTGTTG TATCTGCTAT AAGTATGATA ACAATAAAGA TCCTAGTCTC TGGTTAACCT GCAATTCAGA TCCTCCATTG GACGGTGAAT CTTGTGGCTT ATCTTGCCAC CTGGTTTGCG CTTTCAACAA TGAGAATTCG GGTCTGAAAG AGGATACGCC GAGTAGTAAT ATTGATGGAT GCTTCAGCTG TGTTTTCTGT GGCAAGGAAA ACAGCAAGAT AGAATGTTTG AAGAAGCAAC TGATCATTGC AAATGAAGAA AGAAGAGTAG GTGTGTTTTG TTTCCGCATT CTCATGGCTC ATAAGCTTCT CAAGGGAACA AACAAGTACA CACTAGTATC TAAAGAGGTG GAGGAAGCTG TGAAGCATCT AGAAACTGAA TTCGGTGTTC CTATTACTGG TCTTCCATCG GAGTTGAGTA GAGGGCTCGT TAACAGACTT TGCTGCGCGA AAAAAGTCAA GGGACATTGC TCTTCTGCTC TGAAAGAGCT TGATAGTCTT CCACTGCCTT CTACTATTCA AGGATCATTG AAGATCAAAA TTGAGTCTGT TCTAGCAACT TCTGTAACTT TCATTATGGA TGTCGAAGAA TCTTTCTCAT GGGGAGATAC CAATCATTAC CGGATGTTCC ATCGAAAGGC CACAGAGAGA TATTACTCGG AGCATTTGAC TCGTGAGTTG TTCAGTGTAA CAAGTTACCC AAGGTTTAAT GTCTTGGAAC TAACTCCAGC TACAGAGTAT TGCTTCAAGA TTGTTTCCTT TAGCGGCGTC GAAGAAGTGA GCGTAGATGA ATTCAGAGTC TCTACACAAA CCCTCCAAGA AGAAGAAGAT GACAAAGAAG CGGCAGCAGT TTTAATGAAT ATGCCAAACT GCGAAAATCT TTCACTTCCA CCACCGCCTT CCTTAGAAAC AGATAGACAG GAGAATGGGA ACAAAATGGA GAGATTTGGG CTTGAGCAAT GTGTGAAGCT CATTAGGCAG CTAGAGTGCT CAGGTAAGGT CAAGAGTGAT TTCAGAGTGA AGTTTCTGAC TTGGTATAGC TTAAGAGCGA CGTCTAAGGA GAAACATATC GTGGAGATCT GTGTTGATAC TTTCAAAGAC GATACAGTAG CTCTGGCTGA GAAGCTCATT GATATATTCT CTGATTGCAT ATCAAGGAAG CGTCCTGCGA TTGGTGGTGG CAGTAGCGGT GGTGGTGACT GTGAGTCTGC TGGATTGTGT TTGATGCTGC TGAGCATTGA TTATAGGAGA TCGGATGATA AGCATTGATT CAAGTTTTAG GTCTTTTT 
Length1738
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT2G18880.1
Descriptionvernalization5/VIN3-like
TAIR curator summary
Alias[VEL2][VIL3][vernalization5/VIN3-like 2][VIN3-like 3]
Gene coexpression
MR
MR Locus Description
12 Ahg489252
22.891 Ahg473652 C2H2 and C2HC zinc fingers superfamily protein
24.6171 Ahg917622
25.923 Ahg931100 nuclear factor Y, subunit B7
30.9354 Ahg494372 Protein of unknown function, DUF599
31.6228 Ahg933443
38.6782 Ahg944962
49.2341 Ahg348900 Domain of unknown function (DUF26)
54.4977 Ahg473386 Domain of unknown function (DUF313)
55.7225 Ahg477403
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression