Detail



ID : Ahg931980

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931980|scaffold_304437.1
Sequence
ACCACTTACG ATAATATATC ATGAAGTCTC TTCTTCTCCT TGCCTTTTTC CTCTCTTTCT TCTTCGGCTC TCTCTTGGCA AGGCATTTAC CAACACCCTC CCATCCAAGT CATCATCATG TGGGAATGAC CGGGACATTA ATGAAGCGTC AGAGGAGGAG GCCGGACACG GTGCAAGTGG CTGGGTCTAG GTTGCCAGAC TGCTCACACG CGTGTGGCTC ATGCTCCCCA TGCAGACTTG TGATGGTTAG CTTTGTGTGT GCATCGCTCC AAGAGGCTGA GACTTGTCCA ATGGCTTACA AGTGCATGTG CAACAACAAG TCCTACCCCG TCCCATGATC AGCCTTTCCT ACACTTATT 
Length359
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22702480.. 22702914
Download Sequence
A.thaliana
AGI-codeAT2G20875.1
Descriptionepidermal patterning factor 1
TAIR curator summaryEncodes a secretory peptide EPF1 involved in stomatal development. EPF1 is related to EPF2 which controls asymmetric cell divisions during stomatal devlopment.
Alias[EPF1][EPIDERMAL PATTERNING FACTOR 1]
Gene coexpression
MR
MR Locus Description
28.3549 Ahg927503 Leucine-rich repeat (LRR) family protein
29.2575 Ahg888283 growth-regulating factor 2
42.1189 Ahg477690 Li-tolerant lipase 1
48.7442 Ahg489149 FRA8 homolog
56.285 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
66.4078 Ahg477440 serine carboxypeptidase-like 25
67.3053 Ahg926666 Glucose-methanol-choline (GMC) oxidoreductase family protein
68.942 Ahg482818 glycerol-3-phosphate acyltransferase 6
73.2462 Ahg935697 Protein of unknown function (DUF295)
79.6492 Ahg473836 beta-galactosidase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression