Detail



ID : Ahg932726

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932726|scaffold_400714.1
Sequence
TCACTCTTCG CCTTCTATAA ATGTCAATAC ATCAACAAAA TCTCTGTCTA CAAGCTGAAA ATCTTCGAGA CTTGCTCGAG GAGATACGTG GGTATTATAC TCCACCAAGT GAAGTCGTTC CTGAAGATCT AAGTCTTCCA GGTTTAGCTG AGCTCAAAGG TCATTGGCAT GGTTCGCTTG ATGCTAGTGG TGGAGGCAAT GGAGACACTT TGGCCGAATT TGACTTCCAT GGAGATGATT GGGAGTGGGG GACTTACAAA ACACAGCGTG TTCTGGCTAC TGGTTCGTAT AGCAATGATG ATGGTTTACG TCTTAAGGAG ATGCTTATTC AAAAAGGAAA CGCTACACTG CATGCAGATG GGACCTTATT GGGGCCAAAA ACCAATCTTC ATTTTGCTGT TCTGAATTTC CCTGTTAGTT TGATACCTAC CTTGGTTGAG GTTGTTGAAT CATCAGCTAC TGATCTTGTT CACTCTTTGA GGAAACTCTT GTCACCAATC AAAGGCATTT TGCACATGGA AGGGGATCTT AGAGGGAGTC TTGAAAAACC AGAATGTGAT GTACAAGTTA GATTATTGGA TGGTGCTGTT GGTGGTATAG ACCTTGGACG AGCTGAAGTT TTTGCTTCTC TTACATCTAA CAGTCGTTTT CTTTTCAACT CCAACTTTGA ACCATTTGTC CAAAATGGTC ATGTCCATAT ACAAGGAAGT GTTCCTGTTA GCTTTTCGCA GAAAAAATTG TCTGAGGGAG AAGACAGCGA AACAGATAGA GGTGGTGCAG TGAAAATCCC TAGTTGGGCA AAAGAAAAGG AAGATGATGA GAAGAGAACC TCAAGGGATA GGAGCGAAGA GAGATGGGAT AGCCAACTAG CTGAGAGTCT CAAGTGTTGG TGTCGGATCC CGCACCAGAA GTCCGAGACC AACCAAAGAT TGCCACGTAG TCAAGATAAT GGCCCATAAA GGATAAAGCC CACTAGACC 
Length979
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4362514.. 4363884
Download Sequence
A.thaliana
AGI-codeAT2G25660.1
Descriptionembryo defective 2410
TAIR curator summary
Alias[emb2410][embryo defective 2410]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg903595 Alba DNA/RNA-binding protein
31.8277 Ahg351609 Protein of Unknown Function (DUF239)
38.8458 Ahg907865 photosystem II reaction center protein B
60.2993 Ahg929770 Protein kinase superfamily protein
66.4078 Ahg344496 extensin proline-rich 1
69.1954 Ahg314403 C2H2 type zinc finger transcription factor family
70.9225 Ahg942510 transposable element gene
72.0833 Ahg489138 Eukaryotic aspartyl protease family protein
77.7303 Ahg342636 AP2/B3-like transcriptional factor family protein
82.2679 Ahg907782
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression