| Annotation |
|---|
| Description | jgi|Araly1|933069|scaffold_401057.1 |
| Sequence |
GAAGTGATCG GAGGTCGAAT ATGCAGAAAG TTTCAGCCGC AGATGAACTC GAAACTAAAC TTGGATTTGG GCTCTTCTCC CAAGGGGAAA CGCGCCTCGG GTGGCTACTC ACATTTGCAT CATCATCTTG GGAAGATGCC GATACTGGGA AAACCTTTAG TTGTGTGGAC CTTTTCTTTG TCACTCAGGA CGGCTCTTCT TTTAAGACTA AGTACAAGTT CCGCCCTTAC TTGTATGCCG CCACCAAAGA CAATATGGAA CTGGAAGTTG AAGCCTACTT GAGACGCCGA TATCAAACAC AAGTTGCTGA TATTCAGATT GTTCACAAAG AAGATCTTGA TCTTAAAAAT CATCTATCTG GCCTGCAAAA AAAATATCTC AAAGTATCAT TTGACACTGT GCAACAATTG GTGGAAGTCA AGAGGGATCT GTTGCATATT GTCGAACGAA ACCTCGCAAA ATTTGATGCA TTTGAAGCAT ACGAATCCAT ATTGGCTGGA AAACGAGAAC AACGTCCTCA AGACTGCTTA GACTCTGTGG TGGACCTCCG CGAGTACGAT GTTCCTTATC ATGTCCGATT TGCAATTGAT AATGATGTGC GTAGTGGGCA ATGGTACAAT GTCAGTATTT CCAGCACTGA TGTCATACTA GAGAAGAGGA CGGATCTTCT CCAACGCGCA GAAGTTCGCG TTTGTGCATT CGATATAGAG ACAGTAAAGC TTCCATTGAA GTTCCCGGAT GCTGAATATG ATCAAATTAT GATGATATCC TACATGGTTG ATGGGCAAGG TTTTCTAATT ACTAACAGAG AGTGTGTTGG CAAAGACATA GAAGATCTGG AATATACACC CAAACCAGAG TTTGAAGGGT ATTTCAAAGT CACGAATGTT AACAACGAGG TTGAACTCCT CCGAAAATGG TTTTCTCATA TGCAAGAGTT GAAACCTGGT ATTTATGTTA CATACAACGG TGACTTTTTT GACTGGCCAT TTATAGAACG GAGAGCATCT CATCATGGGA TCAAAATGAA CGAGGAGTTA GGATTCCGTT GTGATCATAA TCAAGGTGAA TGTCGAGCTA AGTTTGTGTG CCATTTGGAT TGTTTTTCTT GGGTGAAACG TGACAGCTAT CTTCCTCAGG GAAGCCAGGG TCTGAAGGCT GTTACAAAGG CAAAACTGGG TTACGATCCA CTGGAAGTGA ATCCTGAGGA CATGGTTCGG TTTGCAATGG AAAAGCCACA GACAATGGCC TCCTACTCTG TCTCTGATGC TGTTGCAACT TACTACCTAT ACATGACATA TGTCCATCCG TTCGTTTTTT CTCTCGCAAC TATCATTCCA ATGGTCCCTG ATGAGGTTTT ACGCAAAGGG AGTGGCACCC TTTGTGAAAT GCTTTTGATG GTTGAGGCTT ACAAGGCAAA TGTTGTATGT CCCAACAAAA ATCAAGCTGA CCCTGAGAAG TTCTACCAAG GTAAACTTCT TGAAAGCGAG ACATATATTG GTGGCCATGT AGAGTGCCTC CAAAGTGGTG TTTTCAGATC TGACATTCCA ACCAGTTTTA AGCTCGATGC ATCTGCATAC CAGCAACTGA TCGATAACCT TGGTCGGGAT CTGGAATATG CTATCACTGT TGAAGGAAAA ATGAAAATGG ATTCAATTTC CAATTATGAT GAAGTAGAGG ATGTAATCAG GGAAAAGCTC GAGAAGTTAC GGGATGATCC TATACGTGAA GAGGGGCCTC TTATTTATCA CCTTGATGTC GCGGCGATGT ATCCAAATAT CATCTTAACA AACAGGCTTC AGCCACCATC AATAGTTACG GATGAGGTTT GCACAGCATG TGATTTCAAC GGCCCGGAAA AGACCTGTCT TAGAAAACTT GAATGGGTTT GGCGTGGGGT GACGTTCAAG GGAAATAAAA GTGAATATTA CCATCTGAAG AAGCAGATTG AGTCTGAATC TGTTGATGCT GGTGCAAATA TGCAGTCTTC AAAACCTTTT CTTGATCTGC CAAAGGTGGA ACAACAATCC AAATTAAAAG AACGACTGAA AAAATACTGT CAAAAGGCAT ATAGCCGAGT ACTTGACAAG CCATTCACTG AAGTTCGCGA GGCTGGGATA TGCATGAGAG AAAACCCGTT CTATGTGGAC ACTGTGCGTA GCTTTCGAGA TAGGAGGTAT GAATACAAAA CACTTAACAA GGTCTGGAAG GGAAAGTTGT CAGAGGCCAA GGCAAGTGGC AATTCAATCA AGATCCAGGA AGCACATGAC ATGGTAGTGG TTTACGATTC CTTGCAGCTA GCTCATAAGT GTATACTTAA TTCCTTTTAT GGATATGTCA TGCGAAAGGG CGCAAGATGG TACTCCATGG AAATGGCTGG TGTAGTTACT TATACTGGAG CCAAAATCAT CCAGAATGCT CGTTTGCTTA TTGAGCGAAT TGGGAAACCA CTTGAGCTGG ATACAGATGG TATATGGTGT GCTCTCCCTG GATCTTTTCC TGAGAACTTT ACTTTTAAAA CGATAGATAT GAAGAAATTC ACCATCTCGT ATCCGTGTGT AATACTTAAT GTTGATGTGG CGAAGAATAA TTCAAATGAC CAATATCAGA CTCTAGTAGA TCCTGTACGA AAGACATATA ATTCACATAG CGAATGCTCA ATTGAATTTG AAGTGGATGG ACCGTACAAG GCAATGATTA TTCCTGCATC CAAGGAAGAG GGAATCTTAA TTAAGAAGCG GTATGCTGTT TTCAATCATG ACGGAACCAT AGCAGAACTC AAGGGGTTTG AGATGAAGCG TAGAGGAGAG CTGAAACTCA TTAAAGTTTT CCAGGCCGAG CTATTTGACA AATTTCTGCA TGGATCAACC CTTGAAGAGT GTTATTCTGC TGTTGCAGCT GTTGCAGATC GTTGGCTTGA CCTACTCGAG GGTCAAGGAA AATATATTGC CGATAGTGAA TTGCTAGATT ATATATCAGA ATCAAGCACT ATGAGCAAAT CGTTAGCAGA TTATGGTCAA CAAAAGTCAT GTGCAGTGAC CACAGCAAAA CGCCTGGCTG ATTTTCTTGG TGATACAATG GTCAAAGATA AAGGACTGCG CTGCCAATAC ATCGTTGCTC GTGAACCAGA GGGGACACCT GTAAGTGAAC GTGCTGTCCC TGTTGCCATA TTTAAAACGG ATGATCCTGA AAAAAAGTTT TATCTGCAAA AATGGTGCAA GATATCATCA TATACTGGAA TCCGTTCAAT TATTGACTGG AGGTATTACA AGCAGCGTCT TCATTCAGCT ATTCAAAAAG TTATTACCAT TCCTGCTGCA ATGCAGAAGG TGGCAAATCC TGTACTTAGG GTGCGTCATC CTAATTGGCT CGAGAAAAAG GTCTCTGACA AATTTCGTCA GGGAAAAATA GTTGATATGT TTAGCTCAGC AAACAAAGAT GGTGTCGTGG ACAAAAATCA TTTGACAACT CAAGATAATG TACTGGCGGA TATTGAGGAT TTTTACAAAG AAAACAGACC TTCCGTAAAA GGGCCAAAGC CAGTTGCGCA TTCATATGAA GTCGATAGAA ATCACTCTGA GGGTAAGCAG CAAGAGAGTT GGGATCCAGA GTTCCATGAT ATCTCATTTC AGAACGTTGA CAAGAATGTA GATTACCAAG GATGGCTTGA ACTGGAAAAA AGAAAATGGA AAATGACTCT AAAGAATAAG AAAAAAAGAA GGTTTGATGA TCTAAAGCCT TGTAATCAGA TTGATGCTCA CAAGATAAAT AAAAAAGTCT GTAAGGGAAG AGCAGGTGTA GGCTCATACT TTAGGAGGCC TGAAGAAGCT TTGACTAGTT CCTATTTGCA GATAATACAG TTGGTCCAAA GTCCACAGAG CGGGCAATTT TTTGCTTGGG TTGTTGTGGA AGGATTGATG CTTAAGATCC CATTGACGAT CCCAAGGGTG TTTTACATTA ATTCCAAAGC TTCTATAGCT GGAAACTTCA CGGGAAAGTG TATCAACAAG ATTCTTCCTC ATGGAAAGCC TTGTTACAAT TTGATGGAGG TCAATATTCA GGAAGATCAA TTTAAAAAAG AAAGCAAAAA GCTTGCCGCT CTACTTGCAG ACCCCGAAAT TGAGGGCATA TATGAAACTA AGATGCCTCT GGAGTTTAGT GCTATATGTC AGATTGGATG TGTATGCAAA ATTGAAGACA CGGCCAAACA CCGTAACACC CAAGATGGAT GGAAACTTGG TGAACTTCAC AGGATAACTA CAACTGAGTG TCGCTACTTG GAGAATTCAA TTCCACTTGT TTGTTTGTAT CACAGCACCT CAACAGGTCG TGCTATTTAT GTTTTATATT GTCATGCTTT GAAGCGTATG TCTGTTGTGG TAGTCAATCC TTACGGTGAC AAGGAATTAT TATCATCTGC CCTAGAGAGA CAGTTTAGAG ATAGTTGCCA AGAATTGTCA CTTGAGCCAT TTTCTTGGGA TGGTATCCTT TTCCAGGTCG AGTATGTTGA CCATCCAGAA GCTGCCAAGA AAAATTTACA AAAAGCGCTC TGTGAATACA GAGAAGAAAA TTGTGGACCA ACTGTGGCAG TCATTGAATG CCCTGACTTT AACACCATGA AGGAAGGTGT AAAGGCCCTG GACGATTTCC CATGTGTGAG GATTCCCTTC AACGACGATG ACAATAGTTA TCAGCCTGTC TCCTGGCAAC GTCCAGCAGC AAAAATAGCA GTGTTCCGTT GTGCTTCAGC AATTCAGTGG TTGGATCGGA GGATTGCCCA GTCAAGATAC GCCCATGTGC CTCTGGGGAA TTTTGGACGT GATTGGTTAA CGTTCACAGT AGATATCTTC CTGTCCAGGG CACTCCGTGA CGAGCAACAG GTTCTTTGGG TCTCAGATAA TGGTGTTCCA GACCTTGGAG ATATAAACAA TGAAGAGACA TTTCTAGCTG ATGAGACAAG TTTGCTATTC CCTGGAGCGT ACAGAAAAGT GTCTGTGGAG TTAAAGGTCC ATAGATTAGC TGTTAATGCC CTTCTGAAAA GTGACCTGGT GAGTGAAATG GAAGGAGGCA GCTTTTTGGG ATTTGAACAA GGTGTGAATT CTAGAGGAAG TAGCTTAAAC GATAATGGCA GTTTTGATGA GAATAATGGA TGTGCGCAAG CATTTCGTGT CCTGAAACAA TTGATCAAGC GCTTGTTGCA TGATGCGTGT AAGTCTGGCA ATATATATGC TGATTCCATT TTGCAACATC TGTCTTGGTG GCTCCGCAGC CCTTCCTCAA AGCTTCACGA TCCAGCTCTC CATCTCATGC TTCACAAGGT CATGCAAAAG GTGTTTGCGC TGCTTTTGAC TGATTTGCGG AGGTTAGGTG CTATAATAAT ATACGCAGAC TTCTCAAAGG TCATTATCGA CACAGGGAAA TTTGATCTAT CTGCTGCTAA GACTTATTGT GAAAGCTTGC TCACAGTGAT GGGGAGTAGA GATATCTTTA AGTGGATCTT GCTTGAGCCG GTTCACTACT GGCACTCGTT ACTTTTCATG GACCAGCATA ACTATGCTGG TATCCGAGCT ACCGAAGATG AAATTTCAGG TGATGAAGTG ACTATTGAAC CAAAGTGGAG CGTTGCACGG CATTTACCCG AGTATATTCA GAAGGATTTC ATCATAATTG TTGCCACGTT TATATTTGGC CCCTGGAAAT TTGCATTAGA GAAAAAGTGG GGCAGTGCAG AGAGTTTAGA GGCAGATATG GTAGAATATC TCAAGGAACA GATAGGAACC CGGTTCATAA GCATGATTGT TGAGAAGATT GGTAATATCA GGTCACACAT GATGGATATA AACGTGTCAG ATGCATCTTG GGCTTCTGGT CAAGCTCCCA AAGGAGATTA CACGTTCGAA TTTACACAAA TTATTACTGC TGTTCTGGCT CTTGATCAAA ACGTTCAGCA AGATGTTCTG GTAATGAGAA AGAGTCTGTT GAAGTACATT AAAGTAAAAG AATGTGCTGC TGAAGCCGGA TTTATTGATC CTGGGCCATC CTTCATCTTA CCCAACGTGG CTTGCAGCAA CTGCGGTGCC TACAGAGACC TAGATTTCTG CAGAGACCCA GCTCTCTTAA CAGAAAAAGA ATGGTCATGT GCGGATCCGC AATGTGGGAA GATATATGAC AAAGAGCAGA TGGAGAATAG CCTTGTCCAG ATGGTGAGAC AGAGGGAGAG AATGTACCAG TTGCAGGATC TAGTGTGCAA TAGGTGCAAT CAGGTGAAAG CCGCTCATTT GACAGAGCAG TGTGAGTGTT CTGGATCCTT TAGATGCAAG GAGAGTGGTT CAGATTTCCA CAAGAGGATG GAGATTTTCT TGGATATAGC AAAGCGCCTG AAGTTTAGAC TGCTAGAAGA ATGCATCTCC TGGATTTTAT TTGCCACCAG CTGTTGACAA AACAATAACA TTAGTGT |
| Length | 6457 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 10420255.. 10434653 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G27120.1 |
| Description | DNA polymerase epsilon catalytic subunit |
| TAIR curator summary | Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1. |
| Alias | [POL2B][TIL2][TILTED 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 28.3373 |
Ahg909961 | |
| 55.0454 |
Ahg480460 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 58.1378 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 60.3324 |
Ahg928998 | zinc transporter 1 precursor |
| 76.1183 |
Ahg321478 | Fatty acid hydroxylase superfamily |
| 80.2745 |
Ahg472067 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| 82.1462 |
Ahg471347 | Transcription factor jumonji (jmjC) domain-containing protein |
| 82.6136 |
Ahg350409 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
| 94.2337 |
Ahg476072 | Argonaute family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|