Detail



ID : Ahg933725

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933725|scaffold_401713.1
Sequence
TTTTATTTTT CCAGACGGTC ATGGATTATT CAGATGATGA CATAATCGAT ATCTCATCAG GAGAGGAGGA GGAGGATCTT TACATCGATG GTGGTATAGA ATCCGATGAC TACCATTTTG AAGACACAAT TAGTCGATCT GAGAAAAGTT ACGTAATTCT CAAGGAAGAA GATATTCTCA AGCATCAAAG AGACGATATC GAACGAGTTT CCACGGCTCT CTCTCTAAGC CACGTCGAAG CGACCGTTCT TCTTCTTCAC TTTCATTGGA GTGCTAGTAA GATCGAAGAT GAATGGTTTA CGGACGAAGA GAGAATCCGT AAAACCGTTG GAATTAGAGA AGTGAATATC CATTGTGGAA TTTGCTTTGA ATCATACACT CGAGAAGAAA TTGCAAGGGT TTCTTGTGGT CATCCTTATT GCAATACTTG TTGGACTGGT TACATCACTA CAAAAATCGA AGACGGTCCA GGATGTTTAA GGGTTAAATG TCCTGAGCCT TCTTGTTCCG CTGATAAGGA GAAATATCAT AGATATCTTC TTAGGTCTTA TGTCGAAGAA GGGAAGAAGA TTAAATGGTG TCCATCACCG GGATGCGAAT ATGCTATTGA ATTTGGTGGA AGTGGAAGTA GTAGTTACGA TGTTTCTTGT TTGTGTTCGT ATAGGTTCTG CTGGAATTGC TGTGAAGACG CTCATACTCC TGTGGATTGT GAAACGGTGT CAAAGTGGTT ACTAAAGAAC AAGGATGAGT CCGAGAACAC GAATTGGATA CTTGCTAAGA CAAAGCCTTG TCCTAAATGC AAGCGTCCTA TTGAGAAGAA CAATGGATGT AACCATATGT CATGCTCAGC TCCGTGTAGA CATTATTTTT GTTGGGCTTG CCTTCAACCA TTGAGCAGTC ACCAGGCTTG CAACGCGTAT AAAGAAGACA ATGAGGTTGA AACTAAGAGA AAAAGGGCTA AAGATGCGAT CGATAGATAC ACACATTACT ATGAAAGATG GGCATTCAAT CAATCGTCGA GGCTAAAGGC TGTAAGTGAT CTAGAGAAAT GGCAGTCAGT GCAGCTTAAG GAGCTTAGTG ACAATCAGAG CTCACCAGAA AGTCAGCTTC GTTTCACCGT AGATGCGTGG CTTCAGATCA TTGAATGTAG GAGGGTCTTG AAATGGACCT ATGCATATGG ATACTACCTA CTTACTCAAG AGCGTGACAA GCGAGAATTT TTTGAGTATT TGCAAGGGGA GGCAGAAACT GGTTTGGAGA GACTTCATCA TTGTGCAGAG GAGGAGTTGA AACAGTTTAT CGGTAAAACT GTAGACCCAT CAAAAAATTT CGGTGAGCTC CGGATAAAAT TAATTGATTT GACTGTAGTA ACCAGAACCT ACTTCGAAAA TCTGGTGAAA GCTTTGGATA ATGGTCTTGC TGATGTTGCA TATAATGAGA AGAGCCAATC AACACAAGAA CCTGAATCTG AATCTTTTAC CAAAAGACAA AAGTCGGTGG CAAACGGTAG AAGAAGCTTC AAAAGAGGTA ATTGAGATAA GGAAAATAAA ATCTT 
Length1555
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14247360.. 14249566
Download Sequence
A.thaliana
AGI-codeAT2G31780.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[ARI11][ATARI11][ARIADNE 11][ARABIDOPSIS ARIADNE 11]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg474038 glycosyl hydrolase 9C1
32.1248 Ahg933461 UDP-glucosyl transferase 71C1
33.4664 Ahg915186
36.0416 Ahg473114 Papain family cysteine protease
37.6829 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
50.04 Ahg932118 Protein of unknown function (DUF1278)
58.4808 Ahg342045
58.9406 Ahg342312 ERD (early-responsive to dehydration stress) family protein
60.1498 Ahg891956
66.9328 Ahg488975 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression