Detail



ID : Ahg933964

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933964|scaffold_401952.1
Sequence
TGAATCTTAC AAGTAATTCA ATGACAACCA AAGTAGCAGC AAATTCTGCT GCTTACGAAG CCATAGTTCG AGCAGGTCCT CGTGTAAAGC AACTTCAACA AGTTCATGCT CACCTCATTG TCACTAGCTA TGGTCGTAGC CGGAGTCTCT TGACAAAGCT CATCACTTTA GCTTGTTCCG CTCGAGCCAT CGCTTATACT CATCTTCTCT TCCTCTCTGT TCCTCTTCCC GATGACTTCC TCTTCAATTC GGTCATTAAA TCGACTTCTA AGTTGCGTTT ACCTTTGCAT TGCGTTGCTT ATTACCGTCG TATGCTATCT TCTAACGTCT CTCCGAGTAA CTACACTTTT ACCTCTGTTA TCAAGTCTTG CGCTGATCTC TCTGCCTTGA AAATCGGAAA AGGTGTTCAT TGTCATGCAG TGGTTTCTGG GTTTGGATTG GATACTTATG TTCAGGCTGC TTTGGTGACG TTTTATTCAA AGTGCGGAGA TATGGAGGCG GCACGCCAAG TGTTCGATAG AATGCCTGAC AAGTCTGTTG TCGCGTGGAA TTCGTTGGTT TCTGGGTTTG AGCAAAATGG GTTGGCGGAA GATGCGATTC GGGTGTTCTA TCAGATGCGA GGATCGGGGT TTGAACCGGA TTCAGCGACG TTTGTGAGCC TTCTCTCGGC TTGTGCACAA ACTGGTGCGA TTAGTTTAGG CTCTTGGGTG CATCAGTATA TTGTCTCTGA GGGTCTTGAC GTGAATGTTA AACTCGGTAC TGCGTTGATT AACTTGTATT CTAGGTGCGG TGACGTTGGA AAAGCCCGGG AAGTCTTTGA CAAGATGAAG GAAACTAATG TGGCGGCATG GACGGCAATG ATCTCTGCTT ATGGTACTCA TGGATATGGC AAACAAGCAG TAGACCTGTT TAATAAAATG GAGGATGATT GCGGTCCAAT CCCTAATAAT GTAACATTTG TAGCTGTTTT ATCAGCTTGC GCTCATGCTG GACTCGTTGA GGATGGACGT TCGGTCTACA AGAGAATGAC CGAGAGCTAT AGATTGATCC CAGGAGTGGA ACATCATGTT TGTATGGTAG ATATGCTTGG ACGGGCTGGA TTTCTGGACG AAGCTTATAG ATTCATACAG CAGCTTGATG CTACAGGGAA AGCAACTGCT CCAGCATTGT GGACAGCGAT GCTTGGAGCT TGCAAGATGC ACAGGAACTA TGATCTCGGT GTAGAAATCG CCAAGCGTCT CATAGCCCTC GAGCCAGAAA ATCCCGGTCA TCATGTCATG CTCTCAAATA TCTATGCCTT GAGTGGCAAA ACAGATGAAG TATCACACAT AAGAGATGGA ATGGTGAGGA ATAACCTTAG AAAACAGGTC GGCTATAGCA TAATTGAAGT CGAAAACAAG ACATATCTGT TTAGTATGGG TGATGAGTCT CACCAAGAGA CTGGAGAAAT CTATCGGTAT CTGGAAACTT TGATAAGCCG GTGCAAGGAA ATTGGGTATG CACCGGTTTC TGAAGAAGTG ATGCACCAAG TAGAGGAAGA GGAAAAGGAG TTTGCACTTA GATACCACAG CGAGAAGCTT GCTGTAGCAT TTGGGTTGTT GAAAACAGTA GATTCAGCGA TTACAGTTGT GAAGAATCTG CGCATCTGTG AGGATTGTCA TTCTGCTTTC AAGTACATTT CTATTGTATC CAATAGGCAG ATCATAGTGC GTGATAAGCT TCGGTTCCAC CATTTTCAAA ATGGTTCTTG TTCATGTCTG GACTATTGGT AAGAACAAGA TACAAACACA AGT 
Length1793
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15179133.. 15180928
Download Sequence
A.thaliana
AGI-codeAT2G33760.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.3623 Ahg476881 Tetratricopeptide repeat (TPR)-like superfamily protein
58.2065 Ahg344438
58.2409 Ahg470582 Tetratricopeptide repeat (TPR)-like superfamily protein
66 Ahg480239 FAD-dependent oxidoreductase family protein
74.6458 Ahg496296 Pentatricopeptide repeat (PPR) superfamily protein
75.6571 Ahg949163 Ubiquitin carboxyl-terminal hydrolase family protein
80.0562 Ahg351855
85.8487 Ahg935315 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
91.9456 Ahg942510 transposable element gene
92.3472 Ahg485336 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression