Detail



ID : Ahg935315

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935315|scaffold_403303.1
Sequence
TCCTTGTGGT TGTAGAAAAA AATGAATGAA ACTCCACCAC TACCTCCAGA TGATGATGAT GATCTGAGAC GTATCATGTT GGAGAGGCTT TCAATTGCCG CCGCCAGAGG CGGGTTGGAG ATGCAGGAGA AGCTGAAGAC CATATTTTTT GGCCTTGATA TTCCATCATG CAGCTTTGTG TTCCCCAAAG GTCGTGATCA CCATCTTTAC AAGCATAAAA TTGCTGAATA CACTAAGTCT CCTCCTCTTC ATTCTCCTCC TCCTCCTCTC CCACCAGGCC TAGTTGCTCA ATGCGATTTT AAGTCTAGCC TCACGGAGCA AGTTGCTCTT AACCACGAAC TTTTTGCGTT TAAAGTCCGA GTCCCTGAAG GAGCCCAGTT TGTGGTGCGG TATGGGCGTT ATTTTTGGTG GGCTCTGCGG GATAGAGTGT CTACTGATAC TCAGTTCAAG TTTCTGGATA AGGGAGGTCC AAGGTATCAC TTTTTCTCTC GTATTTGTCT TCAATTTGGT CATCTAATAA GGGCTTGGGA ATATCCTCCG GCTAGTATGG AAGCTCTTCT TGAAGGTTTT TTCACTGCTT TTAATGCTTT CAAGAAAAAG CTAGAGGATG ATGAGGAGCT AGTGGACAAG GTTGAGACTG ATAGGCGTGA TTTTGTGGTT TGTGATGAGT ATTTTGTTGA CCTCGAGAAC AAAGCCCTTG AACTCATTCC AATGGCCATG AGGCATCCTC CTCTGAATGA ACACGATTCT CAGGGTACAT TCAGGGTGCC GCCTGACCTT ATCTTGTTTA GAGTTAGGAT CCCTGAAGGA GGCATGATGC GCAAGGAGCT TGGTATTATT AAGTTCACAG CCCTGTTTGT GGTGCGGTAT GGGAATGAGT TTTGGGATGC TCTGTGGGAT AGAGTGTCTA CTGATACTCA GTTCACGTTT CTGAAAAAGA ATCATGGAAA TGATAGAGGA AGGTATACGC TTCTTTTCTC TCAGCTTCTG CTTGCGTATG GTAATGTAAT AAAGCCTTGG GGACTGATGC CGAGAAAGAG TAACCCGCCG GCTCGTATGG AAGCTGTTCT TAAAGGGTTT TTCACTGCTT TTAATGCTTT CAAGAAAAAG CAAGAGGATG AGGAGGATGA GGTAGTGAAC AAGGTTGTGA GTTGTGACTG ATAGGCGTGA TTTTGTGGTT A 
Length1181
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20378206.. 20379407
Download Sequence
A.thaliana
AGI-codeAT2G43960.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
36.8646 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
49.2747 Ahg316947 Pectin lyase-like superfamily protein
55.9911 Ahg484914 transposable element gene
63.1269 Ahg916296
65.8939 Ahg908002 embryo defective 1745
74.3505 Ahg921700 ENTH/VHS/GAT family protein
85.8487 Ahg933964 Pentatricopeptide repeat (PPR) superfamily protein
94.101 Ahg338146 KNOX/ELK homeobox transcription factor
97.3961 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression