Detail



ID : Ahg934676

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934676|scaffold_402664.1
Sequence
TTTTTGTTTT TTGGGTTACG ATGCAAAGAG TACACAGCAA GCCGATTGAT TCTATCGGAG CTTTTAAGCA TTTAATCAAA CAGAGTAACG GCGGTGACGG TGGAGTGACG GTGGCGGATA TGCAAGAACC GAGCATAGAG ACGGATAAGC TTAGCTACGA GATTTTCTCG ATTCTTGAAA GCAAGTTTCT TTTCGGGTAT GATGATGACC CGAAGCTTAT GGAATCAAGG AGCAGAGACC CGAGTCCGGA GCAAGAAACA GCATCACCGG CGATGGTGGA TGGTTTGAAC GGCGTCGTTC CGGGTTCAAT TAAGAACCAG AGAGGTAAAG TTTGTGTTTT GAGTATCGAT AGTGGTGGAA TGAGAGGGAT TATACCTGGA AAAGCTTTAG CGTATTTAGA ACATGCTCTG AAATCGAAAT CGGGTGACCC GAATGCCCGG ATAGCTGATT ACTTCGACGT AGCTTCCGGT TCCGGTATCG GAGGGATTTT CACGGCGATG CTTTTCGCGT CGAGTGATGG TGACCGTCCG ATCTTCAAAG CGGAAGACAC GTGGCGGTTT TTAGCTAAGA AAGGTAAAAG CTTTTACAAC AAATCACCAC CGGGGATACT AAACCGGGTT ATGAAAACCG GGTCGGGTGG TTCGGGTGGG TCGGGTTCGA AGCTTGAGAA AGCGATGAAG GAGTCGTTTG AGGAGCTTAC GCTTAAAGAC ACGCTCAAAC CGGTTTTGAT TCCTTGTTAC GACCTTACGA GCTCTGCACC GTTCTTGTTT TCACGTGCTG ATGCGTTGGA AACGGACGGT TATGATTTTA AGCTGTGGGA GGTTTGTAGA GCTACGTGGG CTGAGCCAGG AGTGTTTGAG CCGGTGGAGA TGAGATCAGT TGATGGTAAA ACGCGGTGTG TGGCGGTTGA TGGTGGTTTA GCTATGAGTA ATCCTACGGC TGCAGCAATT ACTCATGTGT TGCATAACAA GCAAGAGTTT CCGTTTGTTA GAGGTGTTGA GGATTTGCTT GTGTTGTCAC TTGGTACGGG ACAGTTGGTT GATGTTAAGT ATGATTGTGA TAAGGTTCTG AAGTGGAAGG CTAAGCATTG GGCTCGGCCT GCGGTTCGGA TTTCTGCTGA TGGAGCGGCT GATACTGTGG ATCAGGCTGT TTCCATGGCG TTTGGTCAGT GTAGGAGGAG TAACTACGTC CGTATTCAGG CGAATGGATC AAGCTTTGGT CCGTGCAAAC CAAACATAGA CACAGATGCG AGTCCAAGCA ATGTGAATAT GCTTGTGGGA GTAGCAGAGG AGATGCTGAG GCAAAAGAAC GCAGAGTCTG TTCTGTTTGG TGGTAAAAAA ATCAATGAAG AAAGCAATTA TGAGAAGCTG GATTGGTTAG CCGGTGAACT CGTGCTCGAA CACCAGAGGA GGAGTTGCAG AATCGCTCCC ACTGTAGCGT TCAAGCAATC CGGCGACAGA AGAGTCGATC AACAGACCAT TTTCAAGGAT ATTGATTGTA TGTTTTGAAG ATTTTTATAT TGTATAGATT T 
Length1531
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18062411.. 18064074
Download Sequence
A.thaliana
AGI-codeAT2G39220.1
DescriptionPATATIN-like protein 6
TAIR curator summary
Alias[PLA IIB][PLP6][PATATIN-like protein 6]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg489138 Eukaryotic aspartyl protease family protein
4.89898 Ahg928242 BTB-POZ and MATH domain 2
20 Ahg488046 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
22.6274 Ahg481833 pumilio 3
26.0576 Ahg471472 RNA-binding (RRM/RBD/RNP motifs) family protein
32.4962 Ahg319075
32.7109 Ahg329184 MA3 domain-containing protein
35.2136 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
36.8782 Ahg474332 tRNAse Z3
38.6782 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression