Detail



ID : Ahg935577

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935577|scaffold_403565.1
Sequence
TGGTTTATTC ATCGATACAA CAATGGCTTC CTCACTCACT AGGAACTGCT CTCGCTTCTC CAAAGCCATC TCTGTCCGTT TCATGAGTAA CCTACCGGAG AACACCGTCT ACGGAGGACC AAAGCCGCAA AACCCAAACC AAAGAGTGAC GCTAACGCAT CTCAGACAAA AACACCGGAA AGGAGAACCG ATCACCGTCG TAACTGCCTA CGATTACCCA TCCGCCGTTC ATTTAGACAC AGCTGCTGGT ATCGATGTTT GTCTTGTTGG TGACTCAGCT TCCATGGTTG TTCATGGTCA CGACACAACA CTTCCTATCT CCTTAGACGA GATGCTTGTC CATTGTCGAG CCGTTGCTCG AGGCGCTAAA CGGCCTCTCC TAGTTGGTGA CTTGCCTTTG GTACCTACGA GTCAAGCTCT AGCGGTTGAT ACTGTTGTTA GGGTTTTGAA GGAAGGAGGA ATGGATGCGA TTAAGCTCGA AGGAGGATCC GCTTCTAGGA TCACTGCTGC AAAAGCCATA GTTGAAGCAG GAATTGCGGT TATCGGTCAT GTGGGTCTAA CTCCTCAGGC GATCAGCGTT CTTGGTGGTT TCAGACCCCA AGGCAGAAAC ATAGCTAGTG CTGTTAAAGT TGTTGAGACT GCAATGGCTT TACAAGAAGC TGGATGTTTT TCTGTTGTTT TGGAATGCAT TCCACCTCCT GTGGCTGCTG CTGCAACCTC TGCCCTCAAG ATACCAACCA TTGGCATTGG GGCTGGACCA TTCTGCAGTG GACAGGTGCT AGTTTACCAT GATCTTCTTG GTATGATGCA ACATCCACAT CATGCCAAGG TTACTCCAAA GTTTTGCAAG CAGTACGCTA ATGTAGGAGA AGTGATTAAC AAAGCCTTAA TGGAATACAA AGAAGAAGTC TCTAAAAAAG TGTTTCCAGG TCCTTCTCAC AGTCCTTACA AGATCACAGC AAGCGAGCTC GATGGGTTCT TAACCGAGTT GCAGAATCTT GGCTTTGACA AGGCCGTTTC TGCAGCAGCT TCAGCAACTG AGAACATGGA GCCTTCAAAG TGACAATTGT ATTCCAAAAT CTTG 
Length1084
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21251531.. 21253394
Download Sequence
A.thaliana
AGI-codeAT2G46110.1
Descriptionketopantoate hydroxymethyltransferase 1
TAIR curator summaryEncodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Alias[KPHMT1][PANB1][ketopantoate hydroxymethyltransferase 1]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg927328 arginine/serine-rich protein-related
11.6619 Ahg946697
13.2665 Virus1851
17.3781 Ahg354558
20.6398 Ahg932171
22.9783 Ahg891972 nucleolin like 1
26.0384 Ahg887947
26.4953 Ahg932615
35.7491 Virus1206
40.694 Ahg949448
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression