Detail



ID : Ahg936727

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936727|scaffold_500918.1
Sequence
GTGACTCAAG GCACATCAAA ATGAGCTTCA TTTGGAACGT TTCAATATGT GTCACAGCTT TAGTTGTTAT AGTGATAACC AAATGGTGGT ACCGATGGTC AAACCCCCAG TGTAATGGCA AGTTACCTCC GGGATCAATG GGTTTTCCGA TCATTGGAGA GACAATCGAC TTCTTTAAAC CTCATGGACT CCTCGAGATC TTACCCTTTG TCAAAAAAAG GATGTTAAGG TATGGGCCAC TGTTTCGCAC CAACATTTTC GGAACCAATA CTGTGGTAGC GACGGACCCT GATGTGATCT ACGAGATTTT TCGGCAAGAG AACAAGTCTT TCGTGTTTAG CCTTCCGGAT AATTTTCTCA AGATCTTTGG AAAAGATAAT CTGTTAAGTG AACATGGGGA CGCCCACAAG CATGCCAAAC AAATCACTCT AAATTTTCTT GGCTCTGAGG GATTGAAGCA CAACATGATA GGAGACATGG ACAAAGTGAC CCGCGAGGAA CTTAGATCAA AGGCTAGCCT CGGGAGCTTC GATGTTAAGG AGGCCGTTAC AAGCTTGATA ATAACTCACT TGACCCCCAA GTTGATAAGT AACCTTGGAT CAGAGACTCA AGCAAATCTT ATAGAAAGTT TCAAGGCATG CAATCTTGAT TGGTTTGAGT CATTCACTAG TCTTTCTACC TGGAGATCGT TCTACAAAGC TTTTTCGGGA CGCAAAGCGG CTATGAAGAT GATAAATGAT GTTTTCGTAT CAAGGAAAGA ATCAGGAGAG AATCATGGAG ACTTCCTCAG CACAATGCTA GAAGATGACC GTTTTAATGA GAAAGCCATT ATGGACCACA TCTTTGTTCT TCCGGTTGCT GGTAAAGATG CTATTTCTAC GGTCGTTTCA TTGGCCGTAA ACTTCATTAC GAAAAACCCT AAAGTTTTAT CAGAGTTGAA GAGAGAACAT AAGGCGATTC TTCAAAACAG AGATGATGAA AATTCTGGAA TTACCTGGGA AGAATACAGA CACAACATGA CTTTTACCAA CATGGTGATT AAGGAGACTC TTCGAATGGC AAATGTGGCT CCTGTAATGT TTAGAAAGGC TTTGAACGAT GTCGAAATCA AAGGATATAC AATTCCAGCG GGTTGGATGG TGGTGGTTGC AAGTTCAGTG ATTCATTATG ATCATACGAT ATATGAAAAC CCTTTTGAGT TTAACCCATG GAGATGGGAG GGCAAAGAGC TGCTTAATGG TTCTAAGACG TTCATGGTGT TTGGAGGTGG AGTGAGATCG TGTATTGGTG CAGAGTTTGC AAGGCTTCAG ATTTCAATAT TTATACACAA TCTTGTCACC AACTACGATT TCTCGATGGT CCAAGACTGC GAAGTCACTC GTACTCCACT GCCTTCTTTC CCCAATGGCG TCCATATCAA CATCTCTCAT TCTCCCACCA ACTAAAACGA AGATCTTTAA TCTCA 
Length1465
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G48000.1
Descriptioncytochrome P450, family 708, subfamily A, polypeptide 2
TAIR curator summaryEncodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation.
Alias[CYP708 A2][CYP708A2][THAH][THAH1][CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2]["cytochrome P450, family 708, subfamily A, polypeptide 2"][THALIANOL HYDROXYLASE][THALIANOL HYDROXYLASE 1]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg929121
12.2474 Ahg311764 GDSL-like Lipase/Acylhydrolase superfamily protein
12.6095 Ahg485890 Pleckstrin homology (PH) and lipid-binding START domains-containing protein
16.5227 Ahg473435 F-box and associated interaction domains-containing protein
20.6155 Ahg493853 Exostosin family protein
21.9545 Ahg484455 AP2/B3-like transcriptional factor family protein
22.4277 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
23.2379 Ahg888244
25.6515 Ahg489665 Signal transduction histidine kinase
26.1725 Ahg927040
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression