Detail



ID : Ahg936820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936820|scaffold_501011.1
Sequence
TCTCCAAAGT CTTACCTTTA GACATGGCCA AATCATTTTT CTCTGTCTCC TTCTTCTTCA CCGTCTCTCT TCTCTTTCTC CTCACGGCGG CTTCAGCAAC CGCATTTGCA GAGAACGTTA CTAGTGAGTT GAGATATGAT GGATGTTCTC CTGGAGACAC CGTTGGAGAA TGCATAACCG CGGCGGTTGA GGATGATGAT GAAGGAGTTG AGGCGTTGGT GCGGCGGATT CTTCAACAAA AAAGGTATTT AAGCTACAAA ACTTTGCAGA AGCAGCCGAC TTGTGATGGA AGAATTGCCG GTAATTGCAT AGGAACTGTT AATCCAAAAG GTTCAACTTG TACTTACTAC CAAAGATGCA AACGTGCCGC CTAGTTGTTT CTTTGTTTTT ACAATT 
Length396
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6343359.. 6343754
Download Sequence
A.thaliana
AGI-codeAT3G29780.1
Descriptionralf-like 27
TAIR curator summaryMember of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Alias[RALFL27][ralf-like 27]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg937406 Subtilase family protein
3.16228 Ahg887808 CCT motif family protein
9.79796 Ahg943042 Galactose oxidase/kelch repeat superfamily protein
12 Ahg355911 Galactose oxidase/kelch repeat superfamily protein
13.4164 Ahg936193
14 Ahg912851 Pectin lyase-like superfamily protein
14.3875 Ahg913800
14.7648 Ahg918872 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
15.5563 Ahg332060 diacylglycerol kinase 4
17.4356 Ahg941839
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression