Detail



ID : Ahg355911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355911|fgenesh1_pg.C_scaffold_7003084
Sequence
ATGCAGTCTT CACTTTCAAC TTTCAAGCAT AAGATGTCAA AAGACGAAGG TAAAATTAAC CGAGAAATGT TGATGCTACA AAAAAATCAA GCTCGTGGAA CTAGAGCAAG CTTGAACCAA TTTGACACAA GAAAGCGTCT GATTGTTGGC ACTAAACCCA CCCTCCCTGA TCTGAATGCA AAACTTTGTT CCGACTCGGA AGAAGAAGAA GAAACAATTA AGAATCTCAC AAGTCTTACA CCACAAGCTG CACATTATGG TCTTCCTAAG CTTTTGTTCG ACCTTGAGGT CGAGATCTTT GCCCGTGTTT CATGTTTTCA ATATTGGAAA CTTAACTTTC TCAACAAGCA GTTCTCGCAA CTGCTACGAA ATCGTGAGAT TTTTAAAGTG AGACGAGAAC GCGGACTTGT GCAACCATAT GTGCTTATGT TTTGGAGCGG TGAAACTTGT TGGGCAATGT TTGATAAAGG TTTCAAGAAT TTCCGACAAC TTCCAGAAAT TCCTTCTGAC TTTTGTTTCT TTTCTGGAGA TAAGGAAACG ATTACTGCGG GTACGCATTT GATAGTCATC GGAAGAGAGA AAGAGCGTAT TGTGGTGTGG CGATATGAGC TAGAGATAAA TAAGTGGATC AAAGATAATG AAATGATCAC ACCGCGGGTC ATGTATGCTT CCGCAAGCCG TGGGACCGAT GCATTTTTCG CTGGAGGAAT TAAGACAGGC GAAAAGGGAG TTTCTAATGT TGTGAACATT GCTGAAAGAT ACAATTCCGA TACAAAAACG TGGAAAGCGA TGAAAGCAAT GCACAAGCGA AGAAAATTCA GCTCGGGATG TTTCTTGCGT GGTAAGTTTT ACGCTCTTGG TGGTCGGGAT GAGAATGATG TATATCTTAC TTGTGGAGAA AGTTACGATG AATTAACAGA TTCATGGAAG TTGATACCAA ACATGCTCAA AGGCATGACT TTCATGAATC CCCAATCTCC GCCTCTCATC GCGGTGGTCA AGGACAACCT CTACTTGCTG GAGACATGGT TGAACGAGCT TTGGGTTTAT GATATAAACG CAAACGCATG GAAAAGTCTT GGAGTTGTAC CTGTGAAAGC AAATGCAGCT TTAGGTTGGG GAGTTGCATT TAAGTCAGTT GGAGATAGGC TTTTGGTGAT TGGAGCTTCA GCTACTCAAT CGTGGGATAA CAACACAATG TCAGTTTACA CATGTCGCCC ATCTCCAAAA GTGGAAAAGA TTATTTGGGA GGAGACTCGT TGCGATGGCG TTAAACTCAG CCATTTTATC CGTAACTGTT GTGTGATGCT TGCTTAA 
Length1317
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20752834.. 20754246
Download Sequence
A.thaliana
AGI-codeAT5G40680.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg936820 ralf-like 27
21.6795 Ahg947559 pre-tRNA
24.5153 Ahg947612
27.2029 Ahg942435 Galactose oxidase/kelch repeat superfamily protein
34.4964 Ahg475240 AGAMOUS-like 55
36.9865 Ahg948369 GDSL-like Lipase/Acylhydrolase superfamily protein
45.793 Ahg484455 AP2/B3-like transcriptional factor family protein
53.9166 Ahg350216 Tetratricopeptide repeat (TPR)-like superfamily protein
55.7225 Ahg475920 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
59.1693 Ahg950465 Protein of unknown function (DUF1191)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression