Detail



ID : Ahg937163

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937163|scaffold_501354.1
Sequence
CCCACTTCTT GGGAACAACA ATGGCTTACC AAAATGATGA TGAAGGCTCT ATTGGGACCT CCATGCATGG AGTTACGGCG AGGGAACAAG TCTTCTCCTT CTCTGTCGAC GGCAATGCTA GCCATTTGAT TCAAGTCGTC CGATCGGATG ATCCAACGGC TAAGTTTTCC TTGCCGGTTG ACTCAGAACA TAGAGCAAAA GTGTTCAAAC CATTTTCATT CGCCAAACCA CACATGAGAG CTTTTCACTT AGGATGGATT TCTTTCTTCA CTTGCTTCAT CTCTACTTTT GCCGCCGCAC CTCTCGTTCC CATCATCAGA GATAACCTCG ATTTGACCAA AAATGATATT GGAAACGCCG GAGTCGCCTC GGTTTCCGGC GCTATTTTCT CTAGGCTCGC TATGGGAGCT GTTTGTGACT TGCTCGGGGC TAGGTACGGA ACGGCGTTTT TGCTGATGTT ATCAGCTCCA ACAGTGTTTA GCATGTCCTT TGTGGCTAAC GCTGGTGGCT ACTTAGCCGT CCGGTTCATG ATTGGTTTTT GTCTAGCAAC GTTCGTGTCA TGTCAATATT GGACAAGCGT GATGTTCAAC GGCAAGATAA TCGGACTTGT CAACGGATGT GCCGGAGGGT GGGGAGATAT GGGAGGAGGA GTGACTCAGC TACTCATGCC AATGGTCTTC AACGTCATCA AACTCGCCGG AGCCAGTCCC TTTGTGGCGT GGAGGATCGC CTTCTTCGTC CCCGGGTTTC TACAGGTCAT TATGGGCATT CTTGTGCTCA CTCTTGGACA AGATCTTCCT GATGGAAACC TTAGTACTCT ACAGAAGAAA GGAGATGTTT CCAAAGACAA GTTCTCCAAG GTATTTTGGT ATGCTGTGAT GAACTATAGA ACGTATGTGT TGTTCCTTCT CTATGGATTT TCCATGGGAA TCGAAATGAC CATCAACAAT GTTATCTCAG AGTATTTCTT CGACAGGTTT CAACTTCAAC TTCACACAGC TGGTATGATA GCAGCCAGCT TTGGTATGGC TAACTTCTTC GCTCGTCCCC TTGGTGGCTA TGCATCTGAC ATGTCTGCTC GGTTTTTCGG TATGAGAGGG CGGTTATGGA CCCTTTGGAT TTTACAAACT TCTGGTGGAC TTTTCTGTGT TTGGCTAGGC CGTGCTACTT CACTTCCTAT AGCTATTTTA GCCATGATGC TCTTCTCAGT TGGCGTGCAA GCTGCTTGTG GAGCTATCTT CGGCATCGTT CCTTTTGTCT CGCGCCGCTC CTTAGGGCTA ATATCAGGAC TTACCGGTGC AGGAGGAAAT TTTGGATCGG GACTAACTCA ACTGATTTTT TTCTCTTCCT CAAGATTCCA CACTGCCGAT GGCTTGTCGC TGATGGGAAT CATGGCGATG GTTTTTACGC TTTTGGTTGC GTTTATACAT TTTCCGCAAT GGGGAAGTAT GTTTTTTGGA CCAACAAGTG ACGAGAAGAA AGTATTGGAA GAGCATTATT ACGCAGCCGA GTGGACTGAG GAAGAGAAGC GGCAAGGATT GCATGAAGGT AGCCTTAAAT TTGCAGAGAA TAGTCGATCA GAAAGAGGCC GAAAGGCGGC TGTGGACGGT GCCTCCACGC CAGAAAATCG AACCCCGGCT CATGTTTAGT CTCACGGAAT AGAATGTTT 
Length1669
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11122603.. 11124846
Download Sequence
A.thaliana
AGI-codeAT3G45060.1
Descriptionhigh affinity nitrate transporter 2.6
TAIR curator summarymember of High affinity nitrate transporter family
Alias[ATNRT2.6][NRT2.6][ARABIDOPSIS THALIANA HIGH AFFINITY NITRATE TRANSPORTER 2.6][high affinity nitrate transporter 2.6]
Gene coexpression
MR
MR Locus Description
32.187 Ahg887514 low-molecular-weight cysteine-rich 62
35.2136 Ahg349916 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
37.9605 Ahg321514 proton-dependent oligopeptide transport (POT) family protein
46.2169 Ahg913385 RING/U-box superfamily protein
56.6745 Ahg920259
58.2838 Ahg899853 glutamate receptor 2.2
59.4306 Ahg950363 Cystatin/monellin superfamily protein
64.5988 Ahg491913 cruciferin 3
73.973 Ahg900781 Acyl-CoA N-acyltransferases (NAT) superfamily protein
90.846 Ahg946513
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression