Detail



ID : Ahg937476

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937476|scaffold_501667.1
Sequence
ATAGCCAAGA ACTTCAAAAA ATGCTTAGAG GCATCTTCCA CATTTGCCTC TTGGCCTCAT TTCTTCTTCT ACCGTTCTCC TCTGCTGTAC ACGATAGTGG CTTCACCGGT GGTACCGATG CTCCTCCTCC GTGGGACCAT AATGTTTCCA CACCACCAGA AGCCTCACCA TCCCCAACCC CCACCTCGAG TCCTTCTACC GCCTCTCCAC CGTCTCCCGG ACCAGTGGCT GCACCATCTC CGATCAACAA CGGCTCTGTC TCTGGAGACA TGACATGGTG GTGCAACAAG ACTCCACACG CTGAGACATG CAATTACTAC TTCCGGAAGA GCTCACAAAA CAACATTAAC ATACGACCAC CAAGGTTCCG GTCCGAGTTC TTACGAATGC TGGTCAAGAT AGCACTTGAC CAAGCCGTAA TCACACACAG TCAAACCGTT AAGTTCGGAC CAAGCTGCAC CAACAACCAA AGGAAAGCCG CTTGGTCAGA CTGCGTAAAG CTCTTTCAAA ACACGGTGAC TCAGCTAAAC CGAACGCTCA AGGGACTTAA CCCGGCGGCT AAGGATGATG TCAAGTGTAC AGACTTCGAC GCACAGACTT GGCTCAGCAC GGCTCAAACC AACATTGAAA CGTGCCGGTC CGGATCCGAG GATCTTAACG TCTCAGATTT CGTCATGCCG GCGATATCTA ACAAGAACTT GTCGGATTTG ATTGGAAACT GCTTGGCCGT CAATGGAGTT CTCATGAAGC AACATAATCA TACGACTGCT GCTAACCACA AAGAATACTT CCCAAGCTGG GTTTCAAGAC ACGAGAGAAA ATTACTCGTA TCAGCCACTT TAGCGAAATC GATGCCTCAC CTAGTGGTGG CACAAGACAG GTCCGGCCAT TTCCGGTCGA TCCAAGCTGC CATAAACTTC GCAGCAAAAA GGAGATTCAA GTCAAGATTT GTGATATATG TGAAGAAAGG TGTTTACCGA GAGAACATTG ATGTCGGAAA TGATAACCAC AACATCATGC TAGTCGGTGA TGGCGAGAGA AAAACAATCA TCACAAGTGG CCGAAGCGTC CAGCACGGCT ACACCACCTA TAACTCTGCA ACCGCCGGCT TTGGAGGCCA AAGGTTCGTA GCAAAAGACA TGACATTCAT CAACACGGCG GGGCCATTAC GTGGGCAAGC TGTGGCGGTT CGATCATCCT CTGACCTCGC TGTTTTCTAC CGTGTTGGTA TCCATGGCTT CCAAGACACG CTCTACATTC ACTCACAACG TCAGTTCTTT AGGGAATGTT ACATCTCAGG CACCATCGAC TTTATCTTTG GAAATGCAGC TGTTGTGTTC CAGAACTGCA TGATTCTTGT CCGAAGACCT CTCCATGGCC AAGCCAACAT CATAACCGCA CAAGGTCGCG GTGACCCTTT TCAAAATACA GGGATAACCA TCCATAGCTC AAGGATAATC GCGGCATCTG ATTTGAAGCC TGTGATTCGA GCTTACAAGA CCTATTTAGG CCGACCGTGG CAAGCTTATT CACGCGTCAC AATCATGAAG ACCTATATAG ATAACTCGAT CAGCCCCTTG GGATGGTCTC CTTGGTTAAG AGGATCCAAT TTTGCTCTTA ATACAGTTTT CTATGGAGAG TATAAAAATT TTGGGCCGGG GTCTTCCACA AGATGGCGGG TCCGGTGGAA AGGATTCCAC GCCATAACGA GCACCGCGGT TGCTTCTCGG TTTACTGTGG GAAGTCTTAT CGCCGGCGGC TCATGGTTGC CAGCCACTGG CGTGCCGTTC AAGTCAGGGT TGTGAGGAGA GTCAGCATGT CCTAT 
Length1825
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12532016.. 12534808
Download Sequence
A.thaliana
AGI-codeAT3G47400.1
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.06226 Ahg935027 DTW domain-containing protein
23.3024 Ahg945124 glycine-rich protein
24.2487 Ahg940490 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein
27.1109 Ahg492613
36.0832 Ahg948156
39.598 Ahg934079 FAD-binding Berberine family protein
41.1096 Ahg936082 expansin A15
43.3705 Ahg490093 Saposin-like aspartyl protease family protein
44.0908 Ahg323748 serine carboxypeptidase-like 36
50.7642 Ahg485694 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression