Detail



ID : Ahg940490

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940490|scaffold_601034.1
Sequence
GTTTTGGTTT TTTGTTGTCA ATGGATAAAG CTTCTTCACA AGAGTGTCCT TATCCAGGAT GTTTCTTCTG TGTAATGAAA GAAGGAAACC CAACTAAAAG AAGATCCTGC ATTCTCAAAT TCTTTAGAGA TCTTCCTTCT CAAGACGATG ATGGTCAAGT TCTTCCCATT AGTGGTCTCT GGAACACAGC AATGGCTCAC CCTAATGATC CTGAGTTCAT TGAGCTTGGA ATCTTTGAGT GTATGTCTGC TTTGATATGG AAAGGACTTA AAAACAGGCG TTGGCTATCT CATGACCAGA ACATATACAT TCCTTACTAC GCGGCTCACA TTATCGGGTC TTACACTATG AACATGGAAG AGTTTGCTGA GAGAGCTGTG GAAGCTGGTG TGATTGCTCC ACTTGTTGAG CTTTTAAGAG GTAGGCTTAC TTGGGTCGAA CAGAGAGTGG CGGTTCGTGC TTTAGGGCAT TTAGCTACTT ACCCGAGCAC TTTTCCTGCC GTTGCGGATC ACGGAGAGAT CCTCGAGCTT GCGATACAAT TGGCAATGAG TTCGTTAGAA ATAGTTTACT CTCACTTTTA CCAGTATCCG GATCGAAGGT TGAGTTACCA CTGCGATCTG CTGACACGAG GCATGGGAGG TGTTGAGATG GAGTCAAGAA AAGCAGAGGA ATGGGCAAGC CAGTTGCAGT GCTGGTCTCT TCAGCTCATT AATTGTTTCG CCTTTAAACC TGAGTTTCTT CCCACTCTGT GCAAACCCGA GTTTCTGGTG AATCTTCCGG TTATGTGGGG CGGACTTGTG AATGAGAACT CACCCGCTGG TATCGGTTTG CTTAGAACAA TCTGTCAGCA TAAACTAGGC CGTGGACCTG TTTCTGCGTG TGCAGGAATG ATTGAGGCCT TGTGTAATAT CGCTCGGTCT TCTGATGATT GGCAGTATAT GGCGATAGAA TGTCTTCTTT GGTTGCTTCA AGATCCTAAT ACGTCTCACA AGGTAATTGA TAAGGCGGTG CCAACGCTTG TGGATCTTGC AGAGATCACA AACTTGGGCG ATCACAAGAA ACTTGGAGAT TCCATTGTAA GTGTTCTTCA AGAATGCAGC TCCATGGGTA ACCGTTCAAG GGAATTGATC GAAGAAACGG TAAATTCTCG ACAAAGACTG AAATGGGAGA AGAGTATGCC TAAAGAGGAT CTTCATATCA AACAAGCAGC AGCTTTAGTG GTCAAACTCG AAGGAAACTC TCTCTTTTCA TCAGGAGATA TCGCGGGTGC AGCGGAAAAG TACTCGGAAG CTTTGTCTCT ATGTCCGATG AGGTCGAAGA AGGAAAGAGT AGTGTTGTAT AGCAATCGAG CTCAGTGTCA TCTCTTGCTG CAACAGCCTT TGGTTGCTAT AAGCGACGCC ACACGTGCGC TCTGCTTGCA CAGTCCTGTA AACCGGCATG CTAAGAGTCT TTGGAGAAGA GCTCAGGCCT ATGATATGTT AGGTCTAGCT AAAGAGAGTT TGTTAGATGC GATTCTGTTC ATCAACGAAT GTTCTCAGTC GAATGATCCG GATCTCTCCA TGAGACAGAA CAAGGTTCCT GATTACGCAG AGAGGTTGGT GAAGAAGCAG ATGCGAGCAG CTTGGTTGTT TAAAGAAGCA GCATTGAAGC ATGGAGGTGT GCATAGGAAA GGTGAAGAGA GGGAAGTGTA TGGAAATGAA ACCGATGATT CGGAATGGGA AACAGCGAGT GAGAGCGATA TTGGAGATGA TGGAAGAGAC CATATGGGAC TTGATGATGA GGAGGAGGAG GAAGATGAAG GCCATGGTGA GAAGTGGAAG AACCGGGATA AATTGAGTGA GAAAAATGAG AAAACTTCTG CGAAAGGTAT GAGGCATGGA TACAGTATAA AGCTAGCAGA AGATGAAATA TGAAACCCTG AAACACAATA AGA 
Length1933
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G10200.1
DescriptionARM-repeat/Tetratricopeptide repeat (TPR)-like protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.8062 Ahg927275 mechanosensitive channel of small conductance-like 6
12.9615 Ahg908084 Zinc finger (C3HC4-type RING finger) family protein
13.6382 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
20.2485 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
23.6854 Ahg902707 laccase 6
24.2487 Ahg937476 Plant invertase/pectin methylesterase inhibitor superfamily
24.3721 Ahg477989 GATA transcription factor 15
29.2575 Ahg949262 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
29.3598 Ahg900876 Carbohydrate-binding X8 domain superfamily protein
34.4964 Ahg926538 somatic embryogenesis receptor-like kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression