| Annotation |
|---|
| Description | jgi|Araly1|937833|scaffold_502024.1 |
| Sequence |
TTTCTGGTGG TTGTTTTCGG GTGCACATGG ATCTCGAATT GGCGAACAAC GACGGAGAAC GTAGCCAAAG ACGTCGCTTC ATTTACCGAA GATCTCCGGA CAAGTCTTGT TTCCGAGATT TAAAACATTG GAAAATTTAC ATATCCCAAG ACGAACTTAT CTACAATCGG TTTAGCAAGA GTTTTAGATT CTTATCTCAC CAACAAGACA CTGATTTCTC AGAGATTCAA ACAAAGATCG CACCATTGTT GTTTGAAGCT TATTCAACGA TCCCTCAAGT CTCACAAGTT TCGTACATTA GTAGGGCCGG TCTCCTGTTT TCTTACATTG CAGAATCAAA CACAAGTGTA GCTGTTTTTG CAAATTCCTC GTCGACTTCA AGTGGTGGAG ACTACACTTG GTACACTCAA ACCGTTGATC AATTAACCGG TCGTCTCAAC GGGAACGCAA CGAAATCTCA GCCGTTAGAT TTAACCCATA CAGATTGGTT CCAAGTAGCA CAGAGTGATA ATTACACTAC CGCCTTTCTA GGAACAAGTT TGGGAGGAGA AGAAAACGAG ACTCTAATTC AGAGCGTGGT TAGCTTGTAC AGCAATAAAG GTCTTGTTTC GCTAGGGTTT CCGGTTAAGA CTTTAACTGA TGTTTTGAAC AGTTTGAATC TACACGGCGA AGAGCTTTAC ATGTGGACAA AGGACGAGAC GATGCTTGTT CGTCAAGGTT CACTGAATGC TTCTTTCTTC GTCTCCAATG GATCAATTTG CTTCAGTAGA GAATCTAAAT CTATCGGGTC TCAATGCATC CCTTATAACT GCAGTTCCAG TGGTTACGAG GTGGAGATCA AAAGATCAAA ATTTCAAGCT TTTTGCTCTG TTCTTGAAGT TTCGGGCGTT TCTCTGAGAT ACACACTCAT GTTTCCTAAC AAAAGTGGAG CAACACGCAT AAGGGATCAA GCGGAAAAGG CAATGTATCA ACTTATTGTG GTTACGATAT TTTTTGGCTT GGGTTGGCCT TTGTGGTTTG TGTGGTTTAT GATGCAAGCA ACAAGGAGAG AGATGCATAT GCGTGCAGTG CTAATAAACC AAATGGAAGC AACACAACAG GCTGAGAGAA AGAGCATGAA CAAGAGTCAA GCATTTGCAA ATGCTAGCCA CGATATTAGA GGTGCCCTTG CAGGGATCAA AGGCCTGATT GATATATGTC GTGATGAAGT TAAACCAGGC TCTGACGTAG ATACCACTCT TAGGCAAGTG AATGTTTGCT CCAAGGATTT GGTTGTTCTG CTCAACTCTG TTTTGGACAT GAGCAAAATC GAAAGCGGGA AGATGCATTT AGTGGAAGAA GATTTCAACT TGGCAAAACT TCTTGAAGAC ATCATCGACT TTTACCATCC CGTTGCGATG AAGAAAGGGG TTGATGTAGT TTTGGACCTG CACAATGGCT CGATATTCAA ATTCTCGAAT GTGCGAGGAG ATAGTGGCAA ACTGAAGCAG ATTCTGAACA ATCTTATCAG TAATGCTGTC AAGTTCACAG TGGACGGGCA CATTTCGATC CGAGCTTGGG CTCAAAGGCC AAGTTCCAAA AGCTCTGTGG TCCTGGCATC GGACCCTCAA GGTGTGTCCA AGATTTTGAA GAGTATGTTC TGCAAGAATA AAGACCAGTC ATCAACCTGC GAAACAGAAA TATCGAATTC CATAAGAAAC AACGCCAACA CGATGGAGTT TGTGTTTGAA GTGGACGATA CAGGTAGAGG GATACCTATG GAGATGCGTA AATCGGTGTT TGAAAACAAT GTTCAAGTAA GAGAAACAAG ACACCAAGGA ACTGGTTTAG GGCTTGGCAT TGTACAGTCG TCTTTGGTAA GATTAATGGG AGGAGAGATA AGAATCACCG ACAAGGCCAT GGGAGAGAAA GGAACATGTT TCCAATTCAA TGTTTTATTG ACAACATTAG ATTCTCCTCC AGTAAGTGAC ATGAAAGCGA AACAGGACAT CGAAGTAGGA GGCGAATACG TATCCACGCC AAACCTCGGG CTGACTATAA ATACTTCACT GGGAGCTATT ATGAATATAC GCAACCTGAG TCCTAGATTC AACAACTGTC TCAGCTCAAG TCCAAAGCAA GAATGTTCTA GAGTGGTTCT CCTATTGAAA AACGAAGAAC GCAGAAGAGT TACTGAGAAA TATATAAAGA ATCTTGGGAT TAAAGTTTCA GTGGTGGAGA AATGGGAGCA TTTAAGTTAT GCCCTGGAGA GACTTTTTGG ATTTTCACCT CAGAGTTCCA TGGGAAGAGC AGAGTGTAGC TTGTCAAATC CGAGCTCACG GGAGTTACCA TTGATTGGCA TGGATGGTAT TGATTCAAGA AGCCAACTTC CTAAAAAGAG AAGCAACAGT TTCTCTGCAC TTGTCCTCTT GGTGATTGAT GCAAAAACTG GACCATTTTT TGAGTTGTAC GATATTGTCA AACAGTTTCG TAGAGGCTTG CCCCATGGAA TAACCTGTAA AGTTGTTTGG CTAAACGAAT CGAGCACTCG TGTAAGTGAG AAAGGGGACA TTAGTTGTTC TAGACCCTTG CACGGATCGC ATCTTATGGA AGTCTTGAAG ATGTTACCTG AATTTGGAGG AACTTTTCTA AAAGAAACAC CAACTGAGCT GCAAAGGGAA TCACTGTTGA GACATTCTTT TGTTGCAGAG AGATCACCAA AACAAAATTC CAGATCTTCA GAGAGTGAGA CTTGGGTCAA GTCAGTGCGT ACAGGTGGAA ATCTTATTGG GAACCCAGAG GACGAGCAAG GAACTTCCAA GCCGAGTGAC GATGAATTCT TAAGAGGAAA GAGAGTTCTT GTGGTCGATG ATAACTTTTT AATACGTAAA GTTGCAACAG GAAAGCTAAA GAAGATGGGA GTCTCCGAGG TCAAACAATG CGACAGTGGA AAAGAAGCTT TGAGATTAGT CACTGAAGGG CTTGCACAAA GAAGAGAAGA ACAAGGTTCA ATATATAACC TTCCGTTTGA CTACATATTC ATGGACTGCC AAATTAGGAA AGTGGAGAAA AGTTATGGGG TGCGTATACC AGTTATAGCT GTATCTGGTC ATGATCATGG TTCAAGGGAA GCAAGAGAAA CCATTCAAGC TGGAATGGAC GCCTTCTTAG ATAAAAACTT GAATCAACTT GCAAATGTCA TTAGAGATAT CGAAAGCAAG ACAACTAGTC GACATTAGTA TTTCCATCTC CTCGTTCT |
| Length | 3238 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14065432.. 14069181 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G47430.1 |
| Description | Signal transduction histidine kinase |
| TAIR curator summary | Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte. |
| Alias | [CKI1][CYTOKININ-INDEPENDENT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.8924 |
Ahg483920 | Signal transduction histidine kinase |
| 24.1868 |
Ahg484096 | RING/FYVE/PHD zinc finger superfamily protein |
| 31.0161 |
Ahg921560 | FBD, F-box and Leucine Rich Repeat domains containing protein |
| 39.2428 |
Ahg917925 | ABC2 homolog 16 |
| 41.5211 |
Ahg351608 | Protein of Unknown Function (DUF239) |
| 41.833 |
Virus0657 | |
| 46.0217 |
Ahg344831 | Protein of unknown function, DUF593 |
| 47.2758 |
Ahg494865 | Pectin lyase-like superfamily protein |
| 47.4342 |
Ahg355455 | DNA (cytosine-5-)-methyltransferase family protein |
| 50.5964 |
Ahg916557 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|