Detail



ID : Ahg938187

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938187|scaffold_502378.1
Sequence
GAAAATCCTT CTTCTGCTTA ATGCTGCTAG ATATGGATCT CGGTGTTCTT CTACCATCTC TTATTCCCTC ATTGCAATCT GTTTATGTGC TGGTGTTTTA CTTCGTTTAC TTGGCCGTTG CCGGAGAAAT TCTCCCCGGG AAAGTTATTC GCGGCGTTCT TTTATCAGAT GGCTCTCAAC TTCGTTACCG ATGCAATGGT CTATTGGCAT TAACATTGTT GGTAGCTATT TTGGGAATCT GTGCAAAACT TGGCATTGTA TCACCTCTTG TGGTTGCGGA TAGAGGACTT GAGCTACTCT CTGCTACTTT TATTTTCTGT GTTTTGGTGA CATTAGCATT GTATGTTACT GGGCGAAATT CTTCCGATAA GAGTTCTTCC CTAAAGCCTC ATGTCTCAGG AAATCTTGTA CATGATTGGT GGTTTGGAAT ACAGTTGAAT CCTCAGTTTA TGAGCATCGA TCTCAAGTTT TTCTTTGTCA GAGCCGGGAT GATGGGATGG CTGCTTATCA ATCTCTCTAT TCTGGCAAAA AGTGTGCAGG ATGGTTCCTT GAGTCAGTCG ATGATTCTTT ACCAGATTTT CTGTGCGTTA TATATATTGG ACTACTTTGT TCATGAAGAA TACATGACCT CTACGTGGGA CATAATTGCA GAGAGACTGG GCTTCATGCT AGTGTTTGGA GATCTCCTGT GGATTCCTTT CACTTTTAGC ATTCAGGGCT GGTGGCTTTT GCACAACAAA GTAGAACTAA CAGTTCCTGC TATTGTAGCC AATTGCCTTG TCTTCGTGAT AGGGTACATG GTTTTTCGAG GGGCTAACAA ACAAAAACAT ATCTTTAAGA AGAACCCAAA AACACCTATA TGGGGCAAGC CTCCAGTGGT AGTTGGTGGA AAGTTACTGG CTTCAGGCTA TTGGGGAATT GCAAGGCACT GTAATTACCT TGGCGACTTG ATGCTTGCTC TGTCCTTCAG TTTGCCCTGT GGAATAAGTT CTCCGGTTCC ATATTTCTAC CCAATATATC TTCTGATACT ATTGATATGG AGAGAACGAA GAGACGAGGT TCGATGTGCA GAGAAGTACA AGGAGATCTG GGCAGAGTAT CTTAGACTTG TCCCCTGGAG AATACTTCCT TATGTTTATT AGATGTGCCA AGTCATGAAT CCTTTCAG 
Length1168
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15477181.. 15480042
Download Sequence
A.thaliana
AGI-codeAT3G52940.1
DescriptionErgosterol biosynthesis ERG4/ERG24 family
TAIR curator summaryEncodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.
Alias[ELL1][FK][HYD2][EXTRA-LONG-LIFESPAN 1][FACKEL]
Gene coexpression
MR
MR Locus Description
13.4907 Ahg902806 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
24.4949 Ahg480313 ABC-2 type transporter family protein
25.2982 Ahg892608 Mitochondrial transcription termination factor family protein
30.249 Ahg492992 Leucine-rich repeat (LRR) family protein
42.332 Ahg477176 DROUGHT SENSITIVE 1
44.3621 Ahg496418 structural maintenance of chromosomes 2
47.244 Ahg312456 C2H2-like zinc finger protein
58.8643 Ahg478629 AGC kinase 1.5
68.2788 Ahg317721 Concanavalin A-like lectin family protein
69.4262 Ahg494701 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression