Detail



ID : Ahg938438

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938438|scaffold_502629.1
Sequence
TTTACGCTCT TTTCTACTAA ATGTCTCGCA TACTAGTAGA AGATGATAAT GCAACACCGT TTCATTCCAT GGAGATTATT AGCTCGTCGT TGACTTTAGG TCAACTTCTC AAGAACGTTA GCGACGTTCG AAAGGTACAA GTCGGTGACG AGACTCCTGT TCATGAGTTC TTTGACCGAG ACGGTTCATC ACTTGACGGA GATGATGATC ATCTCATGCG TCCTGTTCCC TTCGTTCTAT CTTTCAACAA TCTCACTTAC AACGTCTCTG TTCGCCGGAA ACTTGAGTTT CACGACCTGG TTCCATGGAG GAGGTCATCT TTCTCCAAGA CCAAGACACT TCTAGACAAT ATCTCCGGTG AGACACGTGA CGGAGAGATT CTTGCCGTTC TTGGAGCTAG CGGGTCAGGT AAATCCACTC TCATTGACGC TTTAGCGAAT CGGATCGCTA AAGGAAGCTT GAAAGGCACG GTAACTCTTA ACGGAGAAGC TCTTCAATCT CGGATGCTCA AGGTTATATC AGCGTATGTA ATGCAAGACG ATCTTCTCTT CCCGATGCTT ACAGTAGAAG AAACCTTAAT GTTTGCAGCT GAGTTTCGCT TACCAAGAAG CTTGCCTAAA TCCAAGAAGA AGCTTCGAGT TCAAGCCCTA ATCGACCAGT TAGGGATAAG AAACGCTGCT AAAACAATCA TCGGAGATGA AGGGCACCGT GGAATCTCTG GTGGAGAACG AAGGCGAGTC TCAATCGGAA TCGACATCAT CCACGACCCG ATTGTTCTCT TCCTCGACGA ACCTACTTCT GGTTTAGATT CCACAAGTGC ATTCATGGTG GTTAAAGTGT TGAAGAGAAT AGCAGAGAGT GGCAGTATCG TAATAATGTC AATACATCAG CCAAGTCACA GAGTTCTCAG TTTGCTTGAT CGTCTTATCT TCTTGTCACG TGGTCACACC GTCTTCAGTG GTTCCCCGGC GAGTCTACCG ACCTTTTTCG CCGGATTTGG CAATCCGATA CCAGAAAACG AGAATCAAAC GGAGTTTGCA CTCGATCTCA TCAGAGAACT CGAAGGATCG GCTGGAGGAA CCAGAGGATT AGTTGAATTC AACAAGAAAT GGCAAGAGAT GAAAAAACAG AGCAATCCTC AAACCCTAAC TCCGCCGGCT TCTCCAAACC CAAATTTAAC CCTGAAAGAG GCGATTTCCG CCAGCATAAG CAGAGGTAAA CTAGTCTCCG GCGGCGGCGC TGGTTCCTCC GTTATAAACC ACGGTGGCGG AACCTTAGCC GTCCCCGCAT TCGCGAATCC GTTCTGGATG GAAATCAAAA CTCTCACCCA ACGCTCAATC CTCAACTCCC GAAGACAACC TGAACTACTC GGAATGCGAT TAGCCACCGT AATCGTCACC GGTTTCATCT TAGCCACCGT GTTTTGGCGA TTAGACAATT CACCAAAAGG CGTACAAGAG CGGCTAGGGT TCTTCGCCTT CGCGATGTCA ACAATGTTCT ACACTTGCGC CGATGCTCTT CCCGTATTTC TCCAGGAACG TTACATCTTC ATGAGAGAAA CAGCTTACAA CGCATACCGG AGATCCTCCT ACGTTCTCTC TCACGCCATT GTTACCTTCC CTTCCCTCAT CTTCCTCTCT TTAGCTTTCG CAGTGACGAC GTTTTGGGCT GTTGGGCTTG AAGGAGGTCC AATGGGCTTT TTGTTCTATT GCTTAATCAT CTTAGCCTCT TTCTGGTCCG GAAGCTCCTT CGTGACCTTC TTATCCGGCG TCGTTCCACA TGTGATGTTA GGCTACACGA TCGTTGTTGC TATTTTAGCT TACTTTTTGC TTTTCAGTGG CTTCTTCATC AACAGAGATC GAATCCCTAA GTATTGGATT TGGTTTCATT ATCTTTCTCT GGTTAAGTAT CCGTACGAGG CGGTTCTTCA GAACGAATTC TCGGATCCTA CGGAATGTTT TGTGAGAGGT GTTCAGCTTT TCGACAACTC GCCTTTGGGA GAATTGACGT ATGGAATGAA GCTGAGGCTT TTGGATTCTG TGAGCCGATC GATTGGGATG AGGATATCTA GCTCTACGTG TTTAACGACG GGTGCTGATA TTTTGAAGCA GCAAGGAGTG ACGCAGCTTA GTAAATGGAA TTGCTTGCTT ATCACGGTAG GTTTCGGATT CCTTTTTAGG GTTTTGTTTT ACTTGTGTTT GTTACTTGGG AGCAAGAACA AGAGGAGGTA AAAATGAAAC GGCTGATGAT AC 
Length2252
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18128476.. 18128788
Download Sequence
A.thaliana
AGI-codeAT3G55090.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG16][ATP-binding cassette G16]
Gene coexpression
MR
MR Locus Description
10.9087 Ahg487556 Integrase-type DNA-binding superfamily protein
33.6452 Ahg938544 jasmonate-regulated gene 21
46.9468 Ahg493746 SGNH hydrolase-type esterase superfamily protein
48 Ahg481945 LOB domain-containing protein 13
51.7591 Ahg490916 PATATIN-like protein 4
66.6333 Ahg934840 laccase 5
76.9155 Ahg947612
78.1985 Ahg342312 ERD (early-responsive to dehydration stress) family protein
78.6893 Ahg481932 laccase 3
83.5703 Ahg496532 cytochrome P450, family 94, subfamily B, polypeptide 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression