Detail



ID : Ahg938544

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938544|scaffold_502735.1
Sequence
CTTTTAAAGT AACCAAAGCC ATGAATATCT TCCAAGACTG GCCTGAGCCT ATAGTCCGTG TCCAATCCTT ATCTGAAAGC AACCTCGGAG CCATACCAAA TCGCTACGTC AAGCCTCTAT CTCAGCGTCC AAACATAACC ACTCACAACA AACACAACCC TCACACCACC ACCATCCCCA TCATTGACTT AGGTCGCCTA TACACAGACG ACCTAACTCT ACAAGCCAAA ACGCTTGATG AGATCTCAAA GGCTTGTAGA GAATGGGGAT TTTTCCAAGT TGTGAACCAT GGGATGAGTC CTCAACTCAT GGACCAAGCT AAAGCAACAT GGAGAGAATT CTTTCATCTT CCCATGGATC TCAAAAATAT GCATGCTAAT TCGCCGAAAA CTTACGAGGG ATATGGAAGC CGACTAGGCG TAGAAAAGGG TGCTATTCTT GATTGGAGCG ACTACTATTA TCTTCATTAC CAACCTTCGT CTTTGAAGGA TTACACCAAG TGGCCTTCCT TGCCTCTTCA TTGCCGAGAA ATATTGGAGG ATTATTGCAA GGAAATGGTG AAACTATGCG AGAAGTTAAT GAAGATACTA TCGAAAAACT TGGGATTACA AGAAGACAGA CTTCAAAATG CGTTTGGTGG TAAAGAGGAA TCAGGAGGTT GTTTAAGGGT TAATTATTAC CCAAAATGCC CTCAGCCGGA GCTGACTCTT GGCATCTCTC CGCACTCCGA TCCCGGTGGA TTAACCATTC TCTTGCCGGA CGAACAAGTC GCCGGTCTTC AGGTCCGTGG ATCCGACGAC GCTTGGATCA CAGTCGAACC AGCTCCTCAT GCTTTCATCG TTAACATTGG TGACCAAATT CAGATGCTGA GCAATTCAAT ATACAAAAGC GTAGAACACA GAGTGATCGT GAGCCCTGCA AATGAGAGGC TATCTTTGGC ATTCTTCTAC AACCCAAAGG GCAATGTTCC GATTGAGCCA TTGAAGGAGA TAGTGACCGT AGATTCACCT GCTCTCTACT CCTCCACCAC ATACGATCGT TACCGTCAAT TCATTCGTAC GCAAGGCCCA CGTAGCAAAT GTCATATCGA CGAACTTAAA TCCCCTCGAT AGTGCGTACT TTTTATTTGA TA 
Length1132
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16756979.. 16759547
Download Sequence
A.thaliana
AGI-codeAT3G55970.1
Descriptionjasmonate-regulated gene 21
TAIR curator summary
Alias[ATJRG21][JRG21][jasmonate-regulated gene 21]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg323821 Purple acid phosphatases superfamily protein
9.84886 Ahg918583 Auxin efflux carrier family protein
10 Ahg487556 Integrase-type DNA-binding superfamily protein
10.3923 Ahg478237 laccase 7
12.0416 Ahg328231 O-methyltransferase family protein
20.3961 Ahg479457 Granulin repeat cysteine protease family protein
22.6053 Ahg944378 Protein of unknown function (DUF1278)
23.5372 Ahg920442 Lactoylglutathione lyase / glyoxalase I family protein
27.3861 Ahg486481 Glycosyl hydrolase superfamily protein
33.6452 Ahg938438 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression