Detail



ID : Ahg939174

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939174|scaffold_503365.1
Sequence
AGAGAAGCCG CCTCCACCAT GATGACACGG CGCAAGAAAC GATCTTGTTC GAATCCAAAG AAAGAAGAAG TAGTGAAATC CGAACCGATC CCGTTCGATC TCGTAATCGA GATACTCTTG AGATTGCCTG CGAAGTCTAT AGCAAGATTT CGTTACGTGT CGAAGCTATG GCAGTCCACA TTGCGAGGTC CACATTTCAC CGAGTCCTTC TTGACCTTAT CTTCGTCTCG TCCGAAGATA TTGTTCACTT GCCTAAAAGA CGGTGAAACG TTCTTCTTCT CATCACCACA TCCTCAAGAT CTGTCTCCTA TATCCGCCAA TATTCATATG AGTTTCCCAG TTAACTGTCC CTCTAATATT TGTCGTCCTG TTCATGGCTG GGTATGTGGT TCACATCAAC GAACTACAAA GGGAACGACG GTTACGGTTC CATTGATATG TAACCCCAGC ACAGGGGAAT CTTTGGCCTT ATGCAAAGTG AAAACAAGGA GGAAGGGAGT GATAAGCTTT TTGGGGTTTG ATCCGATCGA CAAAAAGTTC AAAGTATTGT GCATGACGCG GGCATATGTA GGACGAGCTG ATTCTGAAGA GCATCAAGTT CTCACGTTAG AAACCGGGAA GAAACCGTCA AGGAAAATGA TCGAATGTGA CATACTACAT TATCCTACTG TTGTGGAGCA TACTAATGGC TTTTCTCAAT ATGATGGGGT ATGCATCAAT GGTGTTTTGT ATTACTTAGC CATTGTCCAT GGTGTTTCTG ACCACAGGTA TCCTGATGTA GTATGCTTTG AGTTTAGATC TGATAAATTC AATTATATCA AGAAAGTTGC TGATCATGGC ATGGAAATGT ACTTGAGAGG ACAGCTTGAT TCAACTCTGG TAAACTACAA GGGTAAATTA GCTAAGCTTC AGCCCAACAT GTCTAACAAT GGAGTATGCA CCGGTATTCA ACTATGGGTT CTTGAAGACG CCGAGAAACA CGAATGGTCG AGTCATATCT ACGTTTTGCC TCCTCCGTGG AGGAATGTAT ATGAAGAGAC CAAGTTATGT TTTGTTGGAA CGACTCGTAA AGGTGAAATT GTGTTGTCCC CAAACACTAT ATCCAACTTT TTCTACCTTC TCTACTACAA TCCCGAGAGG AACACTATCA CTATAGTTAA AATCAAAGGA TTGGAAACCT TTAAGAGTCA TAAAGCTTAC ACCTTTGTTG ACCATTTAGA GGATGTGAAG CTTGTGTCAA GTTTTCAAGA TCATGATTGC CTGCTAAGTC TAGCTAGATT TCGTTGCGTA TCGAAGCTAT GTGGTTCCAC ACTTACCAAT CAAGATTTCA CCGAATCTTT CTACACCATC TATTCGTCTC GCCCGAAGCT ATTGTTCACC GTCCTAAAAG ACCGTAAAAC GTTCTTCTTC TCATCATCAA ATCCTCAAGG TGCTTCTCGT TTAGCAGTCA AAATTCATAT GAGTTTCCCA ATTAATCGTC CATATGAAAA TTTTCGTCCT GTATGTGGTT TAAAGCAACA CACTTCAAAG CGAGGGACAA TTAATGTGCC ATTGATATGT AACCCTAGCA CAGGAGAAAC CTTGGCATTA CCCAACCTGA ATACAAAGAG GAAGAGGGGA GTGACAAGCT ATTTAGGGTA TGATCCTATC GACAAACAAT TCAAAGTACT GTGCATGAGC CATACACGTA ACCGACGCTA TTTTAGGTCT GATGAGGTTG AAGTTTTGAC ATTAGGAACT GGAACTCATC CATCATGGAG AATGATCCCA TGTAACATAC CACATGAACT TGTTGTTGTG GATCGTACAT CTAATCATTC GGCATATGAT GGGATATGCG TCAATGGTGT TTTGTATTAC TTGAAGATGC CGAAACACAC CAATGGTCGA GTTATATCTA TCTTTGGCCT CCGCCTCCAG GCCTCCTCCC TGGAAGACAA TAGTTGCAAA AAAGAAATAT ATGTTGGAAC GAGTGATACG GGTGAAATTG TGTTGTCGCA TGACATTATA ACCGATCATT TCTACCTTTC CTACTACAAT CCCGAGAGTA ATACTCTCAC AAGGGTTAGA ATCCAAGGAA TGGAAGCTTT TAAGGAACGT AAAGTTTACA TCTTTCTAGA CCATGTAGAG GATTTGAGGC AAGTGGCAAG GATCATTGGC TCTTAAGTCG GTCCTTGATC ATATTT 
Length2186
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19101339.. 19104688
Download Sequence
A.thaliana
AGI-codeAT3G61340.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.4939 Ahg330566 expansin A26
28.2135 Ahg334843
34.4964 Ahg483920 Signal transduction histidine kinase
34.9428 Ahg920785 tetraspanin11
35.8329 Ahg318936 Domain of unknown function (DUF26)
41.7133 Ahg336658
48.9898 Ahg915384
49.96 Ahg479651 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
52.7731 Ahg895175
57.8273 Ahg941816 C2H2-like zinc finger protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression