| Annotation |
|---|
| Description | jgi|Araly1|939532|scaffold_600076.1 |
| Sequence |
AAATTACCGC ATTTGCCACT ATGAGCTTCT TAATTCCTAA CAGAGGAGCA GGAGGAACCA AGATTCCTCT TTCCATCATT GTTCTCGTTC TTTGTGGTTT CATGTTCTTC ATTCTCTTTT ACACCGAAAG AATCAGCTTG ATGTCTTCTT CTTCCTCTTC GTCTTCATAT TTTTTCAAGC TTAAGTCTTG TCCGAGGAAA GACAACAGCT CGAAACCTAA GGAGAAAATT CAAAAGGAGA GATCAGAAAT TTTAGAAGTG CTTGACGACA GGTTCGAATT CGATCCAGAA GAGTGTAATG TTGCAGCTGG GAAATGGGTT TATAATAGCT CAATCGAACC ACTCTACACC GATAGATCAT GTCCGTACAT TGACCGTCAA TTCTCTTGTA TGAAAAACGG GCAGCCAGAA ACTGATTACC TTCGATGGGA GTGGCAGCCT GATGACTGTA CAATTCCACG ATTTAGTCCG AAGTTAGCTA TGAACAAGCT CAGAGGAAAA AGACTGCTAT TTGTCGGAGA TTCTTTGCAA CGAAGCCAAT GGGAATCATT CGTGTGTTTG GTGGAATCAA TAATACCCGA AGCGGAAAAA TCAATGAAGC GTAGCCGAAA ACACTTTGTC TTTAAAGCAA AGGAATACAA TGCGACTATA GAATTCTATT GGGCACCGTA TATCGTCGAG TCAAACACAG ATATACCTGT GATATCAGAT CCGAAGAAAA GGATAGTGAA AGTGGACTCA GTGAAAGATC GAGCTAAGTT TTGGGAAGGA GCGGATATTT TGGTTTTCAA CACTTATGTT TGGTGGATGA GTGGTCTCCG AATGAAAGCT CTGTGGGGTT CGTTTGGAAA TGGAGAGAGT GGTGCGGAGG CGTTAGACAC ACCAGTGGCT TACAGGCTAG GGCTCAAGAC ATGGGCTAAT TGGGTTGACT CTACCGTTGA CCCTAATAAG ACGAGAGTCT TCTTCACCAC CATGTCTCCT ACTCATACTA GAAGTGCGGA TTGGGGAAAG CCAAATGGCA CGAAGTGTTT CAACGAGACG AAACCCATAA AAGATAAGAA GTTTTGGGGA ACTGGCTCTA ACAAGCAGAT GATGAAAGTC GTGTCAAGCG TCATCAAACA CATGACCACG CACGTGACTG TCATCAACAT CACGCAGCTC TCTGAGTATC GCATAGACGC TCACACATCA GTTTACACCG AGACAGGTGG CAAGATCTTA ACGGCTGAGG AGAGGGCTGA TCCTATGCAT CACGCTGATT GTATACATTG GTGTCTACCT GGATTGCCCG ATACATGGAA CCGGATCTTA TTGGCTCATT TGTAAATCAA GCTAGGAGGA ACCTC |
| Length | 1345 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 274838.. 276559 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G01360.1 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL3][TRICHOME BIREFRINGENCE-LIKE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 52.2015 |
Ahg341194 | Homeodomain-like superfamily protein |
| 56.107 |
Ahg915851 | |
| 81.8474 |
Ahg913058 | F-box and associated interaction domains-containing protein |
| 85.3698 |
Ahg949069 | transposable element gene |
| 96.2808 |
Ahg492896 | iron regulated transporter 2 |
| 99.8749 |
Ahg899351 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|