| Annotation |
|---|
| Description | jgi|Araly1|939595|scaffold_600139.1 |
| Sequence |
AATATCAATA TATCCTCATC ATGTTCTCAA GATTCCATGC TCTGTTTCCT CTTCTTCTTC TCCTTGTAAT TCTTTCAATA AGAACCTATA AATGTGACTC TTCTTCTTCT TCTTCTTTCT CGTTTTCTTC ATTTTCTTCA TCTTCTTCTC AAACTCTTGT TTTGCCTCTA AAGACCCGAA TAACCCCAAC GGATCATCAA CCCACCGACA AACTTCATTT CCACCACAAC GTCACTCTCA CTGTTACTCT CACCGTCGGT ACTCCTCCTC AAAACATCTC CATGGTCATT GACACTGGCA GCGAACTCTC CTGGCTTCGT TGCAACCGTT CCTCAAACCC AAACCCGGTT AATAATTTCG ACCCGACCCG TTCTTCCTCT TATTCTCCAA TCCCCTGTTC CTCACCCACT TGTCGGACCC GGACCCGAGA CTTCCTCATA CCCGCTTCTT GCGATTCAGA CAAACTCTGC CACGCAACTC TTTCCTACGC TGACGCTTCC TCCTCCGAAG GTAACCTCGC CGCCGAGATT TTCCACTTCG GAAACTCGAC CAACGACTCC AACCTCATTT TCGGGTGTAT GGGATCCGTA TCCGGATCCG ACCCGGAAGA AGATACCAAA ACAACCGGGT TATTGGGTAT GAACCGTGGT TCCCTCTCTT TCATCTCTCA GATGGGTTTC CCCAAATTCT CTTATTGCAT CTCCGGCACC GACGATTTCC CGGGGTTTCT TCTCCTCGGC GACTCTAATT TCACGTGGTT AACGCCGTTA AATTACACGC CGTTAATCCG GATCTCCACG CCGTTACCTT ACTTCGACCG TGTAGCTTAC ACCGTCCAGC TCACGGGTAT TAAAGTTAAC GGTAAGCTTT TACCCATCCC TAAATCGGTC CTCCTACCGG ATCACACCGG TGCTGGTCAA ACCATGGTTG ATTCCGGTAC TCAGTTTACT TTCTTGCTTG GACCGGTTTA CACCGCTCTT CGATCTGATT TCTTAAACCA GACAAACGGG ATCTTAACGG TTTACGAAGA CCCGGATTTT GTTTTCCAAG GAACCATGGA TTTGTGCTAC CGGATTTCAC CGTTTCGGAT TCGGACCGGG ATTCTCCACC GGTTACCAAC GGTTTCTCTG GTTTTTGAAG GAGCTGAGAT AGCGGTTTCG GGTCAGCCAC TATTATACCG AGTCCCACAT CTCACGGCTG GGAACGATTC GGTTTATTGT TTCACATTTG GAAACTCCGA TCTTATGGGA ATGGAAGCAT ACGTGATTGG ACACCATCAT CAGCAGAACA TGTGGATCGA ATTTGATCTA CAGAGATCAA GAATCGGTTT AGCTCCGGTA CAGTGTGATG TATCTGGTCA AAGACTCGGA ATCGGATCGT AAAACCATAG ATAACCTGTG TG |
| Length | 1402 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 508132.. 509524 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G02190.1 |
| Description | Eukaryotic aspartyl protease family protein |
| TAIR curator summary | encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. |
| Alias | [ATASP38][EMB24][PCS1][ARABIDOPSIS THALIANA ASPARTIC PROTEASE 38][EMBRYO DEFECTIVE 24][PROMOTION OF CELL SURVIVAL 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 29.2233 |
Ahg477440 | serine carboxypeptidase-like 25 |
| 33.1512 |
Ahg356101 | transposable element gene |
| 41.3521 |
Ahg903841 | IQ-domain 1 |
| 45.0999 |
Ahg926904 | homeobox protein 33 |
| 50.2991 |
Ahg939416 | PATATIN-like protein 9 |
| 65.6658 |
Ahg486528 | GATA transcription factor 4 |
| 66.3325 |
Ahg932956 | 3-ketoacyl-CoA synthase 11 |
| 77.201 |
Ahg472728 | expansin A10 |
| 85.3464 |
Ahg488725 | Protein of Unknown Function (DUF239) |
| 93.3809 |
Ahg483619 | homeobox-leucine zipper protein 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|