Detail


ID : Ahg939678

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939678|scaffold_600222.1
Sequence
TTAAGACGAC GACGGAAGAG ATGAGTAAAT CGTCAACAGA GTCTCCGACA ACGACGACGT CGTTTTGTTC GTTACCGTTC GACGTCATTC TCAATTGTCT GGCTCGTATC TCGAGATTCC ATTATCCAAC TCTATCTCTC GTCTCCAAGG GTTTCCGATC TCTCATCGCT TCTCCTGAGC TCGAGACGAC ACGATCCCGC ATGGGAATAA CAGGGGATCA CCTCTGTGTC TTCATAGACC TGAATAAGAA AAACCCTAAT CCTCGCTGGT TCCTAGTTTC CCCGATTCCC ACACAGAAAT CGAAACCCAT CCCTTCGTTT CCTCATCAAT ATCCCAAATC CTCAACCATT GTCTCAAATG GTTCAAAGAT TTACATAATC GGAGGGTTTG TCAGGAGAAA GAGAAGCAAG AGAGTGTTGA TACTCGATTG TCGATCTCAA CAATGCCGTA GACTCCCCAA CATGCGTCTA CCTCGAGTTT CTCCAGCCGC TGATGTAATC GCCGGTAAGA TCTATGTGAT TGGCGGTTAC GAGTCGAACA ATATCGATGA ATGGGGAGAG GTTTATGACC CAAAGACCCA AACTTGGGAG CCATTATTGC CCACAACACT TGATCTCACC GTCCAAAAGA GTGAGGTTCC AGGTAAATTG GTTATGGGTG GGAAAGTTTA TGCCATGGAT GATGTGTTTG AGCTTACATT GTTGAAGGAT GTATGCTTAG TAGAGATAGA GTTTGTGTTG TGCCAAATAT CGCTTTGGTA TGGGATGCTA GTTTGGCGTG ATGCTAAGTC AGATGATTCT GGGTGGGGTA AGGTAGAGGG ACTTGATGGA ATCTTGCCTG ATGATCTTAT TTTGGTAGCA AACTCTGACG GAGGAAGAAG AAGACTGACA GTTTGGTGGA AGTCGGAGGT GGAAATTTGG TGTGCGGAAA TCTCGTTTGA GAGACGAGGC GGTTTAGAAA AACTTTGGGG GTTCGTTGAA TGGTCTAAGA ATGTGTTTAC CTACGGTATG TGTGACGACA TATGGTGCTC TCGGTCCGAT ATCCTTGTGT TTACCTACGA CATATGTGAC TCTCCGCCCG ATATCCTTTC TGCTATTGTC ACTTACTGAT CAATGGACTT TGCTGTGGA
Length1129
Protein Sequence
Protein Residue
Map Locationscaffold_6: 799428.. 803755
Download Sequence
A.thaliana
AGI-codeAT5G03000.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
37.5633 Ahg351609 Protein of Unknown Function (DUF239)
43.7721 Ahg896275
61.8061 Ahg938139
62.0161 Ahg351608 Protein of Unknown Function (DUF239)
70.5691 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
85.1469 Ahg487412 myb domain protein 33
90.5373 Ahg900378
91.225 Ahg316947 Pectin lyase-like superfamily protein
96.2497 Ahg914199 Plant invertase/pectin methylesterase inhibitor superfamily
97.6729 Ahg930873 general control non-repressible 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression