Detail



ID : Ahg940114

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940114|scaffold_600658.1
Sequence
ATCACTGTTA TTTTTTAAAA ATGAGTTTAA GTGTTAAATC TATATCATAC CGAACTTCGA ACACCAAAGC TTACGGACCA ACTAAGAACA TGATGCCTAG ACGCGTGTTA AATCTATATC ACGTGAAAAC ATGCCGAACT TCGAACACCG AAGCTTACAG ACCAACTAAG GACAGGATGC CTAGGCGCGT GTTAAATCTA TTTCACGTGA AAACATGCCG AACTTCGAAC TGCTTGTGGA AGTGTGTACA AGACCCTTTA CATGTAAGAC CGATTGCTCA TGCTATTTGG GATCCTTATT TTGGTCAACT GCCTGTGGAA GTGTGTATCT TTGGTCGAAA ACTAGTCCTA AGAAGTTTCT CGGAATCACC ATTGGATGTC ACAAATGATT AGATGCTTTA AAAAGTAAAT TAT 
Length413
Protein Sequence
Protein Residue
Map Locationscaffold_112: 2443.. 6359
Download Sequence
A.thaliana
AGI-codeATCG00340.1
DescriptionPhotosystem I, PsaA/PsaB protein
TAIR curator summaryEncodes the D1 subunit of photosystem I and II reaction centers.
Alias[PSAB]
Gene coexpression
MR
MR Locus Description
33.8231 Ahg942602
39.4715 Ahg925500
40.2492 Ahg887895
41.7971 Ahg904884 RNA-binding protein
50.6557 Ahg923932 WAG 1
62.7216 Ahg322576 Nucleic acid-binding, OB-fold-like protein
70.993 Ahg943128
78.8416 Ahg344051 glutamate receptor 2.3
84.8057 Ahg949205 transposable element gene
88.5212 Ahg334275 oligopeptide transporter 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression