Detail



ID : Ahg940278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940278|scaffold_600822.1
Sequence
AAGAGTTATA ATATTTTAAA ATGGAGTCAG CAAACATCTT TGGATCCGAT GAGGATGGTC GTAGCTGTGA ATCTGGATGG ACGATGTATT TAGCCTCGCA GTCCCATGAT CATGACGACG ACTGTTACTA TGATGATGAT GACGAAGAAG CAGAAGATAG CGATGGTGGT GATTCAATGG ATTCCGATGC ATCTTCTGGT CCAATGGAAG CCACATCATC TCTCAAACTT GCGCAAGAGA TTGAGGAGCA AAACTCTATA AAGAAGAAGA AGAAAAGGAC TAATGAAGAG ATGGTTTTGG TGGAGACTAC TAGGGTTCAC AACACCATCA TTGATGATGA CGATGACGAT GATGGGGATA ATCATGATTA TGATGATGGT AATGATAGCT ACAGTGTAGT TCATAGCTAC GTTGGTTCAG TTATACAAAA AGGGTTAGTT TGATTTTATA TAGTGACTTT GTG 
Length463
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3072959.. 3073428
Download Sequence
A.thaliana
AGI-codeAT5G08150.1
Descriptionsuppressor of phytochrome b 5
TAIR curator summaryEncodes SOB5. Activation tagging lines accumulated higher level of cytokinin.
Alias[SOB5][SUPPRESSOR OF PHYTOCHROME B 5]
Gene coexpression
MR
MR Locus Description
10.247 Ahg921306 Integrase-type DNA-binding superfamily protein
16.7929 Ahg922473
38.3406 Ahg497281 ovate family protein 2
44.4972 Ahg476637 RING/U-box superfamily protein
51.8073 Ahg471170 xyloglucan:xyloglucosyl transferase 33
68.3008 Ahg485612 plant U-box 22
81.6701 Ahg475045 Integrase-type DNA-binding superfamily protein
83.3187 Virus2957
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression