Detail



ID : Ahg940494

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940494|scaffold_601038.1
Sequence
CTCTCTTATT GCCGCCACCA CCACCATGTG TGGGATTCTT GCTGTGTTAG GCTGCGTTGA TAACTCTCAA GCTAAACGTT CCCGTATCAT CGAACTCTCT CGCAGATTGA GGCATAGAGG TCCTGACTGG AGTGGGCTAC ATTGTTTTGA GGATTGTTAT TTGGCTCATG AGCGTTTGGC TATCGTTGAC CCCACTTCTG GAGATCAACC ACTCTATAAC GAAGATAAGA CCATTGCTGT CACGGTCAAT GGAGAGATAT ACAACCACAA GGCTTTGCGT GAAAATCTGA AGTCTCACCA GTTTCGTACT GGGAGTGATT GTGAAGTGAT TGCCCATCTT TATGAAGAAC ATGGAGAGGA ATTTGTCGAC ATGTTGGACG GCATGTTTGC ATTTGTCCTT CTTGATTCCC GAGACAAAAG TTTTATTGCT GCAAGGGATG CCATTGGTAT CACTCCACTC TACATTGGGT GGGGTCTCGA TGGTTCTGTC TGGTTTGCTT CGGAGATGAA AGCACTTAGT GATGATTGTG AACAGTTTAT GTGCTTCCCC CCAGGCCACA TCTATTCAAG TAAACAAGGT GGGCTTAGGA GGTGGTACAA CCCCCCGTGG TTCTCTGAGT TGGTTCCTTC AACCCCATAT GATCCCCTAT TGGTGCGCAA TACTTTTGAG AAGGCTGTTA TAAAACGACT AATGACTGAT GTGCCTTTTG GTGTCCTCCT ATCTGGAGGA TTAGACTCAT CCCTTGTTGC TTCAGTAGCG TTACGCCATC TGGAAAAATC AGAAGCTGCT TGTCAGTGGG GTTCAAAGTT GCACACATTT TGTATCGGTT TGAAGGGATC CCCGGATCTG AAAGCTGGCA GAGAAGTCGC TGACTATTTA GGAACTCGCC ACCATGAGTT ACACTTTACA GTCCAGGACG GAATAGATGC CATAGAAGAA GTCATATACC ATGTTGAGAC CTATGACGTA ACTACTATAA GAGCCAGCAC TCCAATGTTT CTAATGTCGA GAAAAATCAA ATCGCTTGGT GTAAAGATGG TTCTTTCTGG GGAAGGCTCT GATGAAATTT TTGGAGGATA TTTGTACTTC CATAAAGCAC CCAACAAGAA GGAATTTCAC GAGGAAACAT GTCGAAAGAT CAAAGCTCTT CATCAATATG ATTGCTTGAG AGCTAACAAA TCAACTTCTG CATGGGGTGT TGAGGCCCGT GTACCTTTCC TGGATAAAGA ATTTATTAAT GTCGCAATGA GCATCGATCC AGAGTGGAAG ATGATTAGGC CTGATTTGGG AAGGATCGAG AAATGGGTGT TACGCAATGC CTTTGATGAT GAGAAAAATC CTTACCTACC AAAGCACATT CTATATAGGC AGAAAGAACA GTTCAGTGAT GGAGTTGGAT ACAGCTGGAT TGATGGTCTA AAAGAACATG CGAACAAACA TGTCTCTGAC ACAATGCTGA TGAACGCAAG CTTTGTCTTC CCTGATAACA CACCTTTGAC AAAAGAAGCT TACTACTACA GAACCATCTT TGAAAAGTTC TTCCCTAAGA GTGCTGCTAG AGCAACTGTA CCAGGAGGTC CAAGTGTGGC ATGTAGTACA GCAAAAGCTG TGGAATGGGA CGCAGCTTGG TCACAGAATC TTGACCCATC AGGTCGTGCG GCTCTTGGAG TTCATGTTTC AGCTTATGGG GAAGATAAAA CCGAAGATTC TCGTCCCGAG AAGCTACAGA AACTAGCAGA GAAGACTCCA GCCATTGTTT GAGGATAAAC AAGGGTTAAG CT 
Length1782
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3925987.. 3929473
Download Sequence
A.thaliana
AGI-codeAT5G10240.1
Descriptionasparagine synthetase 3
TAIR curator summaryEncodes asparagine synthetase (ASN3).
Alias[ASN3][asparagine synthetase 3]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg488911 Uncharacterised protein family (UPF0041)
13.784 Ahg480227 RNA helicase, ATP-dependent, SK12/DOB1 protein
16.8819 Ahg919570 DNA polymerase epsilon catalytic subunit
21.166 Ahg342721
21.8861 Ahg483041 Ribosomal protein L10 family protein
26.0768 Ahg933091 DNA polymerase epsilon catalytic subunit
26.0768 Ahg339800 Tetratricopeptide repeat (TPR)-like superfamily protein
30.9839 Ahg487923 L-Aspartase-like family protein
32.0312 Ahg919445 Ribosomal protein S18
34.5977 Ahg927888 cysteine synthase 26
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression