Detail



ID : Ahg941068

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941068|scaffold_601612.1
Sequence
TAATTAAGGT AACAAAAGAA ATGGGAAGAG GAAGAGTAGA GCTGAAGAGG ATAGAGAACA AAATCAACAG ACAAGTAACG TTTGCAAAGC GTAGGAACGG TTTGTTGAAG AAAGCTTATG AATTGTCTGT TCTTTGTGAT GCTGAGGTTG CTCTCATCAT CTTCTCCAAC CGTGGAAAGC TCTACGAGTT TTGCAGCTCC TCCAACATGC TCAAGACACT GGATCGGTAC CAGAAATGCA GCTATGGCTC CATTGAAGTC AACAACAAAC CTGCCAAAGA ACTTGAGAAC AGCTACAGAG AGTATCTGAA GCTTAAGGGT AGATATGAGA ACCTTCAGCG TCAACAGAGA AATCTTCTTG GGGAGGATCT AGGACCTCTG AATTCAAAGG AGTTAGAACA GCTTGAGCGT CAACTGGACG GTTCTCTCAA GCAAGTTCGG TCCATCAAGA CACAGTACAT GCTTGACCAG CTCTCTGATC TTCAAAATAA AGAGCAAATG TTGCTTGAAA CCAATAGAGC TTTGGCAATG AAGCTGGATG ATATGATTGG TGTGAGAAGT CATCATATGG GAGGAGGATG GGAAGGCGGT GAACAGAATG TTACCTACGC GCATCATCAA GTTCAGTCTC AGGGACTATA CCAGCCTCTT GAATGCAATC CAACTCTGCA AATGGGGTAT GATAATCCGG TATGCTCGGA GCAAATAACT GCGACAACAC AAGCTCAGGC GCAGCAGGGA AACGGTTACA TCCCAGGGTG GATGCTTTGA GAGTCATGTG ATGTGATAAA 
Length790
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6169704.. 6171988
Download Sequence
A.thaliana
AGI-codeAT5G15800.2
DescriptionK-box region and MADS-box transcription factor family protein
TAIR curator summaryEncodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.
Alias[AGL2][SEP1][AGAMOUS-like 2][SEPALLATA1]
Gene coexpression
MR
MR Locus Description
10.4881 Ahg486059 Protein of unknown function (DUF567)
38.923 Ahg336658
51.1664 Ahg489727 KNOTTED-like from Arabidopsis thaliana
60.7947 Ahg326812 HCO3- transporter family
67.1491 Ahg914329
76.1709 Ahg938140
90.4212 Ahg328109 Late embryogenesis abundant (LEA) protein
91.0604 Ahg936150 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression