Detail



ID : Ahg941530

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941530|scaffold_602074.1
Sequence
CAGATTCATC CAAAAAAAAA AATGGAACAT CAAACAACTC CAAAGCAGAA AACAAAGGAG AAGAGCAAAG GCAACAAGAC TAAGTTTGTG GGAGTTAGGC AAAGGCCTTC AGGAAAATGG GTGGCAGAGA TCAAAGACAC TACACAAAAG ATACGGATGT GGCTCGGAAC TTTTGAGACC GCAGAGGAAG CCGCTCGAGC CTACGATGAA GCTGCCTGTC TTTTACGTGG CTCCAATACT CGCACCAATT TCGCAAACCA TTTTCCTAAC AACTCACAAC TTTCTTTGAA GATCAGAAAC CTCCTTCACC AGAAGCAGAG CATGAAGCAA CAACAACAAC AACACAAACC CGTTTCTTCT TTTGCGGACT GCAGCATCAA CTACACTTCG ACTGCTACTA GTCTCACCAC AACTACCACC ACTACCACGG CTATGCCGCT CAATAATGTG TACAGACCAG ATTCATCGGT CATTGGGCAA CCAGAAACCG ACAGTCTCCA GCTTCCTTAT TCATGGCCCC TTGTCTCTGG ATTCAACCAT CAGATTCCAT TGGCTCAGGG AGGGGGAGAA GAAACACATG GACATCTCAA CGATCACTAC TCAACCGATC AACATTTGGG TCTTGCAGAA ATCGAAAGAC AGATATCTGC GTCCCTATAT GCAATGAATG GAGCTAACAG TTACTATGAC AACATGAATG CAGAATATGC AATTTTCGAT CCTACCGATC CCATTTGGGA TCTCCCTTCA CTCTCCCAAC TTTTCTGCCC TACGTGATTC CAATTTACTT TTCCTAAT 
Length798
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7984350.. 7985147
Download Sequence
A.thaliana
AGI-codeAT5G19790.1
Descriptionrelated to AP2 11
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
Alias[RAP2.11][related to AP2 11]
Gene coexpression
MR
MR Locus Description
9.32738 Ahg929733 ROTUNDIFOLIA like 20
12.8452 Ahg897391 ferric reductase-like transmembrane component family protein
16.6132 Ahg933363
17.2047 Ahg941587 beta-1,3-glucanase 5
20.9762 Ahg941368 Integrase-type DNA-binding superfamily protein
24.1868 Ahg320698 Concanavalin A-like lectin protein kinase family protein
25.2785 Ahg907722 MATE efflux family protein
25.865 Ahg473001
32.5576 Ahg351693
33.4515 Ahg908535 disease resistance protein (TIR-NBS-LRR class)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression