Detail



ID : Ahg941855

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941855|scaffold_602399.1
Sequence
TTGATTTAAT CATCTTGACT AATGGCCGGA AGGGCTGCGA CGTCGTCGGC GAAATGGGCG AAAGAGTTTT TGTTCAGAAG AGTCTCGTCG AATCCTCTTG GAGCTACCCG AAACTGTTCT TCGGTTCCTG GAGCTTCTTC TGCACCTAAA GTTCCTCATT TTTCCAAGAA AGGAAGGATA TTGACAGGAG CTACCATTGG TCTGGCCATA GCTGGAGGAG CTTATGTGAG TACTGCAGAT GAAGCAACCT TCTGTGGGTG GCTATTCAAC GCAACAAAGG TTGTGAATCC TTTCTTTGCT CTTCTGGATG CTGAGTTTGC ACATAAGCTT GCTGTTTCGG CTGCGGCTCG TGGGTGGGTA CCTAGAGAAA AGAGGCCTGA TCCAGCAATC TTGGGACTTG AAGTTTGGGG AAGGAAATTC TCAAACCCGA TTGGGCTTGC TGCTGGATTT GACAAAAACG CTGAGGCTAC CGAAGGACTG CTAGGAATGG GATTTGGATT TGTTGAGGTA GGCTCTGTAA CTCCTGTTCC ACAAGAAGGC AATCCGAAAC CACGCATCTT CAGATTAAGC CAAGAAGGAG CTATTATCAA TAGGTGTGGA TTTAATAGCG AAGGGATTGT TGTCGTTGCA AAGCGGTTGG GTGCTCAACA TGGTAAAAGA ATGTTGGCGG AAACATCAGG TACTTCGTCA TCTCCAAGTG ATGATGTAAA ACCAGGGGGG AAATCTGGAC CTGGTATTCT TGGGGTCAAC CTTGGAAAGA ACAAGACGAG TGAGGATGCT GCTGCTGACT ATGTCCAAGG AGTTCATAAC TTATCCCAGT ATGCTGATTA CTTGGTGATC AATGTTTCAT CACCCAATAC TGCAGGGCTC CGCATGCTTC AGGGAAGGAA ACAGTTGAAG GACCTTGTAA AGAAGGTTCA AGCTGCTCGG GATGAGATGC AATGGGGTGA TGAAGGTCCT CCTCCTCTTC TTGTGAAGAT TGCTCCTGAT CTGTCCAGAG GAGAGCTTGA AGATATTGCA GCGGTGGCTC TTGCTTTGCA CTTGGATGGG CTGATCATAT CAAATACAAC AGTCTCAAGG CCAGATCCTG TAAGCAACAA CCCCGTGGCA ACAGAAGCAG GTGGTTTGAG CGGGAAACCA CTCTTTCCTC TCTCCACCAA CATGTTGAGA GATATGTACA CTCTGACACG AGGAAAGATT CCATTGATAG GCTGTGGTGG GGTTAGTAGT GGTGAGGATG CTTACAAGAA AATAAGAGCC GGAGCTACTC TTGTTCAGCT GTACACGGGA TTTGCATATG GAGGACCTGC CCTCATCCCA CAAATAAAGG AGGAACTGGT GAAATGCTTA GAAAGGGATG GCTTCAAGTC AATCCATGAA GCAATTGGTG CGGATCACAG ATGATAAAAC TCAAAGAGCA ATACG 
Length1425
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9475231.. 9477829
Download Sequence
A.thaliana
AGI-codeAT5G23300.1
Descriptionpyrimidine d
TAIR curator summarydihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis
Alias[PYRD][pyrimidine d]
Gene coexpression
MR
MR Locus Description
10.7238 Ahg919553 DNA ligase 1
12.8841 Ahg926563 P-loop containing nucleoside triphosphate hydrolases superfamily protein
13.0767 Ahg476028 male gametophyte defective 3
14.8661 Ahg472772 Tetratricopeptide repeat (TPR)-like superfamily protein
15.2315 Ahg491917 prohibitin 1
18.0555 Ahg489552 Ribosomal L22e protein family
19.8746 Ahg473200 carbamoyl phosphate synthetase B
22.0227 Ahg479867 ribonucleotide reductase 2A
22.2486 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
22.383 Ahg906386 oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression