Detail



ID : Ahg479867

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479867|fgenesh2_kg.3__2568__AT3G23580.1
Sequence
CGTTGCCTTG AAAATCACGC CAAAGAGACA AAACACAATT TTTATTTATT TTTTTTTAGT TTCTTGTCGG TTTCCAAGGG TTTTTGTTTA GGGTTTTCAT TTTTTTTTTC CTATCTATCT AATCCTCTGT TTCTCCGCAT CAAAAAAAAT GAGAGACGAA TTCGTGATAA TGGGTTCGCT GAAGGAAAGG CAAAGAAGAG ACATGGAAGA AGATGAATCA AAGGAGCCAC TTTTGATGGC ACAGAACCAG AGATTCACTA TGTTCCCCAT TAGGTACAAA TCGATTTGGG AGATGTATAA GAAGGCTGAA GCCAGTTTCT GGACTGCTGA AGAGGTTGAT CTTTCCACTG ATGTGCAACA ATGGGAAGCC TTGACGGATT CTGAGAAACA TTTTATCAGC CATGTTCTGG CTTTTTTCGC CGCGTCAGAT GGTATTGTAT TGGAGAATTT GGCTGCTAGA TTCTTGAATG ATGTCCAAGT TCCAGAGGCT CGTGCTTTCT ATGGGTTTCA AATAGCCATG GAGAACATTC ATTCAGAGAT GTACAGCTTA CTTCTGGAGA CATTCATAAA GGACTCGAAG GAGAAGGATA GATTGTTCAA TGCTATCGAG ACCATTCCTT GTATTTCCAA GAAGGCAAAA TGGTGTTTAG ATTGGATTCA GAGTCCTTTG TCGTTTGCTG TGAGGTTGGT TGCTTTTGCA TGCGTCGAAG GAATTTTCTT CTCAGGAAGT TTCTGTGCCA TCTTCTGGCT TAAGAAGAGG GGTCTTATGC CGGGTTTGAC CTTTTCAAAC GAGCTTATAT CGAGAGACGA GGGGCTCCAC TGTGACTTTG CGTGTCTCTT GTACAGTTTG CTGCAGAAGC AGCTTCCGTT GGAGAAAGTT TATCAGATTG TTCACGAGGC AGTGGAAATT GAGACAGAGT TTGTCTGCAA GGCTCTTCCA TGTGATCTGA TCGGAATGAA CTCAAACCTC ATGAGTCAGT ACATACAATT TGTCGCTGAC CGTCTTCTGG TTACCTTGGG ATGTGAAAGG AGATACAAAG CAGAAAATCC ATTTGACTGG ATGGAGTTCA TTTCTCTACA AGGAAAGACA AACTTCTTTG AGAAGAGAGT GGGAGAGTAT CAGAAGGCAT CGGTTATGTC GAACCTCCAA AATGGAAGTA AGAACTACGA ATTCACAACT GAAGAGGACT TCTGAATGAA ACCCCCATCG AATCTGGAAG GGCTCATCAA AGTTAGATTC TTTATGAGTC A 
Length1251
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10153616.. 10156428
Download Sequence
A.thaliana
AGI-codeAT3G23580.1
Descriptionribonucleotide reductase 2A
TAIR curator summaryEncodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.
Alias[RNR2][RNR2A][ribonucleotide reductase 2A]
Gene coexpression
MR
MR Locus Description
17.5499 Ahg315321 beta glucosidase 4
22.0227 Ahg941855 pyrimidine d
24.8797 Ahg320951 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
26.533 Ahg485580 DNA binding
27.7128 Ahg478911
30.8869 Ahg471136 SKP1-like 18
32.3574 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
37.8286 Ahg927275 mechanosensitive channel of small conductance-like 6
38.9872 Ahg339621 Mitochondrial substrate carrier family protein
39.1535 Ahg494409 RAB GTPase homolog A1C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression