| Annotation |
|---|
| Description | jgi|Araly1|941869|scaffold_602413.1 |
| Sequence |
GAGACCGAGC AAAGGAAGAA ATGGCTGGAC CATCGACGAC TTCAAACGCA CCAAAGCAGA GGAAGAGAGT CGAAGCCGAA ACTAGCAGCA ATACTTCTAC TACCTTACGT CGCGCTAAAG ACGGAAGCGC TTTCGCTCTC TGTGAAGGAT GTAACAAGAG TGTAGCTGTA GCGCTTATAA GCATGCACAA TTGCAGTCTC GATGCTAAAA TCAGAGGCAA TCTCGAAGCT CAAGTTGTGG AGACACAAGC AGAGGCTAAG AAGAAACCTG CAGAGAAGAA GAAGACAACA TCTGATGGAC CTAAGCCAAA GAGACTTAAG AAAACCAAGG ATGAGAAGAA GACCTCTTCT ACTTCAAACA AGCCTAAACG ACCTCTTACC GCTTTCTTTA TCTTCATGAA TGATTTCCGT AAAACTTTTA AAACAGAGCA TAATGGTTCA TTAGCTAAGG ATGCTGCGAA GATCGGTGGT GAGAAGTGGA AGTCTTTGAC TGAGGAAGAG AAGAAAGTTT ATCTGGATAA AGCTGCTGAA CTTAAGGCAG AGTATAACAA GTCACTGGAA AGCAATGATG CTGATGAGGA AGTATGTGCC TTTTTTAACT AATGGGTAGT CTTTCACTTT TT |
| Length | 622 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9517875.. 9519071 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G23420.1 |
| Description | high-mobility group box 6 |
| TAIR curator summary | Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain. |
| Alias | [HMGB6][high-mobility group box 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.4317 |
Ahg485860 | histone H2A 11 |
| 19.1311 |
Ahg925614 | chromatin assembly factor-1 (FASCIATA1) (FAS1) |
| 22.9783 |
Ahg490375 | Minichromosome maintenance (MCM2/3/5) family protein |
| 27.2397 |
Ahg475864 | DNA polymerase alpha 2 |
| 30.3974 |
Ahg358300 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 33.1964 |
Ahg920750 | Pathogenesis-related thaumatin superfamily protein |
| 37.9473 |
Ahg919570 | DNA polymerase epsilon catalytic subunit |
| 43.566 |
Ahg484971 | Histone superfamily protein |
| 46.3897 |
Ahg494222 | Pectin lyase-like superfamily protein |
| 48.9898 |
Ahg903003 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|